RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ZNF585BQ52M93 769 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 KLF17Q5JT82 389 aaPredicted RBP5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 TPTE2P1Q5T6R2 138 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 CYB5R2Q6BCY4 276 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 LIN54Q6MZP7 749 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 LHFPL4Q7Z7J7 247 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 C12orf45Q8N5I9 185 aaPredicted RBP5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 OR51H1Q8NH63 302 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 LHFPL5Q8TAF8 219 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 C17orf50Q8WW18 174 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 S1PR3Q99500 378 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 HSD17B10Q99714 261 aaKnown RBP5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 TMEM222Q9H0R3 208 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 KCNIP3Q9Y2W7 256 aa5.68□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV3OR16-10A0A075B7F0 116 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 A0A0B4J2A0 478 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 SCO2A0A1W2PP80 73 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 HMX3A6NHT5 357 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 ZNF785A8K8V0 405 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 RNF212BA8MTL3 300 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 LEUTXA8MZ59 168 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 J3QLI3 93 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 NPFFO15130 113 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 SSNA1O43805 119 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 RAMP3O60896 148 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 CDS2O95674 445 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 IGKV1-39P01597 117 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 IGKV1D-39P04432 117 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 SULT1A3P0DMM9 295 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 SULT1A4P0DMN0 295 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 CXCL3P19876 107 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 IL3RAP26951 378 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 HTR1DP28221 377 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 LPAR6P43657 344 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 THBS3P49746 956 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 RRAS2P62070 204 aaPredicted RBP5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 KRTAP1-1Q07627 177 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 FCN2Q15485 313 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 MLANAQ16655 118 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 OR2B11Q5JQS5 317 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 FAM71F2Q6NXP2 309 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 C11orf88Q6PI97 169 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 DYNAPQ8N1N2 210 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 LRTM2Q8N967 370 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 UXS1Q8NBZ7 420 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 OR11H7Q8NGC8 314 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 TCTEX1D2Q8WW35 142 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 C18orf12Q96KH6 178 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 TMEM56Q96MV1 263 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 PHB2Q99623 299 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 NABP2Q9BQ15 211 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 MRPL20Q9BYC9 149 aaKnown RBP5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 MED28Q9H204 178 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 DPM3Q9P2X0 92 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 SHPKQ9UHJ6 478 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 AMMECR1Q9Y4X0 333 aaPredicted RBP5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 TMEM56-RWDD3S4R434 201 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 CELSR2Q9HCU4 2923 aa5.67□□□□□ -1.5
LSM3P3-201ENST00000436601 DOPEY2Q9Y3R5 2298 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV1-3A0A0C4DH29 117 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 A0A1W2PPI3 338 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 H0YJW9 148 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 HOXA3O43365 443 aaPredicted RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 FCGR3BO75015 233 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 ADAP1O75689 374 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 B3GALNT1O75752 331 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 GAPDHP04406 335 aaKnown RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV4-38-2P0DP08 117 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 ANXA3P12429 323 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 HLA-GP17693 338 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 PAX6P26367 422 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 ZNF816Q0VGE8 651 aaPredicted RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 CATR1Q13166 79 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 MIDNQ504T8 468 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 MINOS1Q5TGZ0 78 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 TMEM268Q5VZI3 342 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 RUSC1-AS1Q66K80 236 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 LYZL2Q7Z4W2 148 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 TGIF2LXQ8IUE1 241 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 SELENOHQ8IZQ5 122 aaKnown RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 SPAG16Q8N0X2 631 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 LGI3Q8N145 548 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 TCTEX1D1Q8N7M0 179 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 SLC35G3Q8N808 338 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 COQ8AQ8NI60 647 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 CFHR4Q92496 578 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 RPEQ96AT9 228 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 ADTRPQ96IZ2 230 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 HEYLQ9NQ87 328 aaPredicted RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 FAM212BQ9NTI7 297 aaPredicted RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 LIN7CQ9NUP9 197 aaKnown RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 HILPDAQ9Y5L2 63 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 SOX21Q9Y651 276 aaPredicted RBP5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 MINOS1-NBL1R4GNA1 71 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 PDZD2O15018 2839 aa5.66□□□□□ -1.5
LSM3P3-201ENST00000436601 IGHV3-72A0A0B4J1Y9 119 aa5.65□□□□□ -1.5
LSM3P3-201ENST00000436601 TRAV40A0A0B4J280 105 aa5.65□□□□□ -1.5
LSM3P3-201ENST00000436601 A0A0G2JRQ6 117 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms