RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 IGKV1D-39P04432 117 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 HOXB5P09067 269 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 IGHV4-38-2P0DP08 117 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 SSX2Q16385 188 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 LYZL2Q7Z4W2 148 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 PDPNQ86YL7 162 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 OR5M8Q8NGP6 311 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 TMED3Q9Y3Q3 217 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 ZNF469Q96JG9 3925 aaPredicted RBP18.58■□□□□ 0.56
CPSF4-204ENST00000436336 S1PR2O95136 353 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 RAB13P51153 203 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 KLF17Q5JT82 389 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-204ENST00000436336 MOB3BQ86TA1 216 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 WASHC3Q9Y3C0 194 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 MYO9AB2RTY4 2548 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 FLNAP21333 2647 aaKnown RBP18.57■□□□□ 0.56
CPSF4-204ENST00000436336 IGHV3OR16-10A0A075B7F0 116 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 H7C2Y5 167 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 CCSO14618 274 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 ATG12O94817 140 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 IFNA21P01568 189 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 RUSC1-AS1Q66K80 236 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 AJUBAQ96IF1 538 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 COMMD9Q9P000 198 aa18.57■□□□□ 0.56
CPSF4-204ENST00000436336 CRYZL1O95825 349 aa18.56■□□□□ 0.56
CPSF4-204ENST00000436336 VDAC1P21796 283 aa18.56■□□□□ 0.56
CPSF4-204ENST00000436336 GGNBP1Q5YKI7 109 aa18.56■□□□□ 0.56
CPSF4-204ENST00000436336 C17orf50Q8WW18 174 aa18.56■□□□□ 0.56
CPSF4-204ENST00000436336 BPIFB3P59826 476 aa18.55■□□□□ 0.56
CPSF4-204ENST00000436336 HABP2Q14520 560 aaPredicted RBP18.55■□□□□ 0.56
CPSF4-204ENST00000436336 BRD3OSQ6XYD6 125 aa18.55■□□□□ 0.56
CPSF4-204ENST00000436336 AKAP14Q86UN6 197 aa18.55■□□□□ 0.56
CPSF4-204ENST00000436336 DYNAPQ8N1N2 210 aa18.55■□□□□ 0.56
CPSF4-204ENST00000436336 ZNF436Q9C0F3 470 aaPredicted RBP18.55■□□□□ 0.56
CPSF4-204ENST00000436336 TIMM23O14925 209 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 CD5LO43866 347 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 SIX6O95475 246 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 IGKV1-16P04430 117 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 ARHGDIBP52566 201 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 AKR1C2P52895 323 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 TMEM177Q53S58 311 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 GSG1LQ6UXU4 331 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 OR4C13Q8NGP0 309 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 OSR1Q8TAX0 266 aaPredicted RBP18.54■□□□□ 0.56
CPSF4-204ENST00000436336 CFHR4Q92496 578 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 LSM10Q969L4 123 aaKnown RBP18.54■□□□□ 0.56
CPSF4-204ENST00000436336 SEC22AQ96IW7 307 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 ZANQ9Y493 2812 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 IGHV3-72A0A0B4J1Y9 119 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 FAM25EA8MYX2 175 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 PFDN1O60925 122 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 CCNKO75909 580 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 NQO2P16083 231 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 CD1BP29016 333 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 H2BFSP57053 126 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 KRTAP1-1Q07627 177 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 NANPQ8TBE9 248 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 FLYWCH2Q96CP2 140 aaKnown RBP18.54■□□□□ 0.56
CPSF4-204ENST00000436336 R3HDM4Q96D70 268 aa18.54■□□□□ 0.56
CPSF4-204ENST00000436336 RRNAD1Q96FB5 475 aaKnown RBP18.54■□□□□ 0.56
CPSF4-204ENST00000436336 C13orf42A0A1B0GVH6 325 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 C5orf51A6NDU8 294 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 KRASP01116 189 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 FSHBP01225 129 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 IGKV1-5P01602 117 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 G6PCP35575 357 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 CD83Q01151 205 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 NMSQ5H8A3 153 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 RNASE11Q8TAA1 199 aaKnown RBP18.53■□□□□ 0.56
CPSF4-204ENST00000436336 NEURL2Q9BR09 285 aa18.53■□□□□ 0.56
CPSF4-204ENST00000436336 MARCH11A6NNE9 402 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 MPTX1A8MV57 137 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 OR2A4O95047 310 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 HRASP01112 189 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 FAM219AQ8IW50 185 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 ASB13Q8WXK3 278 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 OR10C1Q96KK4 312 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 OR2A7Q96R45 310 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 AIFM2Q9BRQ8 373 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 PDCD10Q9BUL8 212 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 NUP50Q9UKX7 468 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 MMP24Q9Y5R2 645 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 TEX15Q9BXT5 2789 aa18.52■□□□□ 0.56
CPSF4-204ENST00000436336 SHOXO15266 292 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 PAX6P26367 422 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 ERVK-16P61578 105 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 TEX29Q8N6K0 151 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 ST6GAL2Q96JF0 529 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 SPIN2AQ99865 258 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 SPIN2BQ9BPZ2 258 aa18.52■□□□□ 0.55
CPSF4-204ENST00000436336 NOTCH2Q04721 2471 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 A0A0G2JRQ6 117 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 GIPP09681 153 aaPredicted RBP18.51■□□□□ 0.55
CPSF4-204ENST00000436336 SRSF4Q08170 494 aaKnown RBP18.51■□□□□ 0.55
CPSF4-204ENST00000436336 POU2AF1Q16633 256 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 SPNS3Q6ZMD2 512 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 DMBX1Q8NFW5 382 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 C2orf50Q96LR7 162 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 HARBI1Q96MB7 349 aa18.51■□□□□ 0.55
CPSF4-204ENST00000436336 CHIAQ9BZP6 476 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms