RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PKIBQ9C010 78 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 MEF2CQ06413 473 aaPredicted RBP9.65□□□□□ -0.86
SCN4A-201ENST00000435607 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
SCN4A-201ENST00000435607 LINC00470Q9BZP3 86 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 KLK15Q9H2R5 256 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 IL36RNQ9UBH0 155 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 PLP1P60201 277 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 TMEM136Q6ZRR5 245 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 MTURNQ8N3F0 131 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 SRSF12Q8WXF0 261 aaKnown RBP9.65□□□□□ -0.86
SCN4A-201ENST00000435607 OR51M1Q9H341 326 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 TUBD1Q9UJT1 453 aa9.65□□□□□ -0.86
SCN4A-201ENST00000435607 IL4P05112 153 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 ABCA4P78363 2273 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 TRBV20OR9-2A0A075B6H5 130 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 LEPROTL1O95214 131 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 DSCR9P59020 149 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 FOXC2Q99958 501 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.87
SCN4A-201ENST00000435607 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 OGG1O15527 345 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 OR4D5Q8NGN0 318 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 MARVELD3Q96A59 401 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 PILRBQ9UKJ0 227 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 DIDO1Q9BTC0 2240 aaKnown RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 A0A1B0GVG6 124 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 HSPE1P61604 102 aaKnown RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 LCN2P80188 198 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 PSG4Q00888 419 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 OR9G4Q8NGQ1 327 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 LINC01560Q8TB33 94 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A10PA6NDY2 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A18PA6NE21 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A16PA6NEW6 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A20PA6NIJ5 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A22PA8MWA6 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 UPK3AO75631 287 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 LDLRAD2Q5SZI1 272 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 C9orf40Q8IXQ3 194 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 WDFY2Q96P53 400 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 RPRMQ9NS64 109 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 C8orf88P0DMB2 117 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF25P17030 456 aaPredicted RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 MMP16P51512 607 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 A0A0J9YW62 118 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 BGLAPP02818 100 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 TIMM23BQ5SRD1 257 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF501Q96CX3 271 aaPredicted RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 POLR2AP24928 1970 aaKnown RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 FAM186AA6NE01 2351 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 A0A087X0M5 115 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 A0A1B0GX30 115 aa9.64□□□□□ -0.87
SCN4A-201ENST00000435607 IL6RP08887 468 aaPredicted RBP9.64□□□□□ -0.87
SCN4A-201ENST00000435607 AWAT1Q58HT5 328 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 TCF23Q7RTU1 214 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF721Q8TF20 911 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 ABCA1O95477 2261 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 EREGO14944 169 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 UCP3P55916 312 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF146Q15072 292 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF385AQ96PM9 386 aaKnown RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 CRYBB2P43320 205 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 HOGA1Q86XE5 327 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 TPRX1Q8N7U7 411 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 LRTM2Q8N967 370 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 OR4C45A6NMZ5 311 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 AMY1AP04745 511 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 NGFRP08138 427 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 SNRPEP62304 92 aaKnown RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 C7orf71A4D174 169 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 FAM90A26D6RGX4 464 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 EFNB2P52799 333 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms