RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 COLCA2A8K830 154 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 THBDP07204 575 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR4A8P0C604 315 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR9G9P0C7N8 305 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 ADIPOQQ15848 244 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 PRAMEF5Q5TYX0 476 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 ETV3LQ6ZN32 361 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 RXFP4Q8TDU9 374 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
LIMK1-203ENST00000435201 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 MGAQ8IWI9 3026 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 NKX6-3A6NJ46 265 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 C17orf100A8MU93 164 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 GYPAP02724 150 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 NQO2P16083 231 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 GNB2P62879 340 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 VWC2Q2TAL6 325 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 DEFB108BQ8NET1 73 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR52E5Q8NH55 327 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR4A16Q8NH70 328 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 OR4S2Q8NH73 311 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 DDB2Q92466 427 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 CORO2AQ92828 525 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 SNRNP40Q96DI7 357 aaKnown RBP13.82□□□□□ -0.2
LIMK1-203ENST00000435201 RCC1LQ96I51 464 aaKnown RBP13.82□□□□□ -0.2
LIMK1-203ENST00000435201 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 CCL13Q99616 98 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 LINC00574Q9H8X3 128 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 IDI2-AS1Q9NZ38 188 aa13.82□□□□□ -0.2
LIMK1-203ENST00000435201 DYSFO75923 2080 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 VSTM5A8MXK1 200 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 SLC31A2O15432 143 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 SPCS3P61009 180 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 RPP30P78346 268 aaKnown RBP13.81□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF726P1Q15940 193 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 PDLIM3Q53GG5 364 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-203ENST00000435201 DUX4L9Q6RFH8 374 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-203ENST00000435201 C20orf24Q9BUV8 137 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 CISD1Q9NZ45 108 aaKnown RBP13.81□□□□□ -0.2
LIMK1-203ENST00000435201 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 BSNQ9UPA5 3926 aa13.81□□□□□ -0.2
LIMK1-203ENST00000435201 IFNA17P01571 189 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 MBP02144 154 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 FOLR2P14207 255 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 AKR1C3P42330 323 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 THBS3P49746 956 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 ELLP55199 621 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-203ENST00000435201 CT45A1Q5HYN5 189 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 TCF23Q7RTU1 214 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 FAM216BQ8N7L0 139 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 CT45A3Q8NHU0 189 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 EGLN1Q9GZT9 426 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 GNG13Q9P2W3 67 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
LIMK1-203ENST00000435201 ZGRF1Q86YA3 2104 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-203ENST00000435201 APC2O95996 2303 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 SAA2-SAA4A0A096LPE2 208 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 IFNA1P01562 189 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 IGHV3-7P01780 117 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 CRYBA1P05813 215 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 SAA2P0DJI9 122 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-203ENST00000435201 BCL2P10415 239 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 FGF7P21781 194 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 OR2B8PP59922 312 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 CYB561D1Q8N8Q1 229 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF439Q8NDP4 499 aa13.8□□□□□ -0.2
LIMK1-203ENST00000435201 TRAV38-1A0A0B4J264 116 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 hADV38S2A0JD32 116 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 CCL8P80075 99 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 PMS2P11Q13670 270 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 TMEM140Q9NV12 185 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 ACACAQ13085 2346 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 HCFC1P51610 2035 aa13.79□□□□□ -0.2
LIMK1-203ENST00000435201 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 H3BQ15 152 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 MT-ND4LP03901 98 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 ARG1P05089 322 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 MRPS11P82912 194 aaKnown RBP13.78□□□□□ -0.2
LIMK1-203ENST00000435201 RELBQ01201 579 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-203ENST00000435201 SSX7Q7RTT5 188 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 C1orf87Q8N0U7 546 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 RND1Q92730 232 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 LEAP2Q969E1 77 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 C17orf112F2Z3M2 114 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 TLE1Q04724 770 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 RNF212Q495C1 297 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 ZNF709Q8N972 641 aa13.78□□□□□ -0.2
LIMK1-203ENST00000435201 OR10A7Q8NGE5 316 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms