RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 BSNQ9UPA5 3926 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CHD3Q12873 2000 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 LRRC30A6NM36 301 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 C1orf196B1AJZ1 125 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 C15orf65H3BRN8 121 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 F2RL2O00254 374 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 AGPAT2O15120 278 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TGOLN2O43493 480 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TNFSF12O43508 249 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 IFNA1P01562 189 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 S100A8P05109 93 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 CRYBA1P05813 215 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 GRPP07492 148 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 AGAP20933 346 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 PTAFRP25105 342 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 GNB2P62879 340 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-204ENST00000433822 ICAM4Q14773 271 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 ALKBH6Q3KRA9 238 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 KRTCAP3Q53RY4 240 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 CLEC9AQ6UXN8 241 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 Q6ZR03 302 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 MRGPRGQ86SM5 289 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 VASH2Q86V25 355 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 CXorf67Q86X51 503 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-204ENST00000433822 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 GCSAMQ8N6F7 178 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 CNEP1R1Q8N9A8 125 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 RXFP4Q8TDU9 374 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 FAM222BQ8WU58 562 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TAF15Q92804 592 aaKnown RBP eCLIP6.19□□□□□ -1.42
COL17A1-204ENST00000433822 YPEL4Q96NS1 127 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF251Q9BRH9 671 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM147Q9BVK8 224 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 GGACTQ9BVM4 153 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 OR51B6Q9H340 312 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 RPS10P5Q9NQ39 176 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 OR6C3Q9NZP0 311 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 OR14J1Q9UGF5 321 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 TINAGQ9UJW2 476 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 KCNS2Q9ULS6 477 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 PPP1R3CQ9UQK1 317 aa6.19□□□□□ -1.42
COL17A1-204ENST00000433822 A6NLC8 198 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 PMS2P5A8MQ11 134 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 H0YL77 283 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 LHBP01229 141 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 BCL2P10415 239 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 WT1P19544 449 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 MDKP21741 143 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 OMGP23515 440 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 NFYBP25208 207 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 CEACAM8P31997 349 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 RAB7AP51149 207 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 COL10A1Q03692 680 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 Q3ZCU0 254 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 KRBOX4Q5JUW0 171 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 SLC25A24Q6NUK1 477 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 RBMS3Q6XE24 437 aaKnown RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 THNSL2Q86YJ6 484 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM217Q8N7C4 229 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF610Q8N9Z0 462 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 OR1L1Q8NH94 360 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 Q8TCH9 128 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 TVP23CQ96ET8 276 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 C14orf79Q96F83 325 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 NIPSNAP3BQ9BS92 247 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 AGMATQ9BSE5 352 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 FAM234AQ9H0X4 552 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 OR2D2Q9H210 308 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 LINC00574Q9H8X3 128 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 RPRMQ9NS64 109 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 METTL1Q9UBP6 276 aaKnown RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 FBXO7Q9Y3I1 522 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
COL17A1-204ENST00000433822 CSMD1Q96PZ7 3565 aa6.18□□□□□ -1.42
COL17A1-204ENST00000433822 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 TRGV8A0A0C4DH27 118 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 ODAMA1E959 279 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 FNDC10F2Z333 226 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 M0R036 132 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 UBE2CO00762 179 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 MPDU1O75352 247 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CLDN1O95832 211 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 HPRT1P00492 218 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CRYAAP02489 173 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CGB3P0DN86 165 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 CGB7P0DN87 165 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 RAB5AP20339 215 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 PRDX2P32119 198 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 GABRA2P47869 451 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 RND2P52198 227 aa6.17□□□□□ -1.42
COL17A1-204ENST00000433822 ATP5IP56385 69 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-204ENST00000433822 KLF3P57682 345 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms