RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 GUK1Q16774 197 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 DEFB115Q30KQ5 88 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 BPIFB6Q8NFQ5 453 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 OR2M3Q8NG83 312 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 OR8K1Q8NGG5 319 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 OR4C13Q8NGP0 309 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 OR2K2Q8NGT1 345 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 PPTC7Q8NI37 304 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 LXNQ9BS40 222 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 GABARAPL1Q9H0R8 117 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 ARMC1Q9NVT9 282 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 CMTM6Q9NX76 183 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 FBXL3Q9UKT7 428 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 SCML1Q9UN30 329 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 GINS2Q9Y248 185 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.3□□□□□ -1.88
USP54-206ENST00000433394 MIA3Q5JRA6 1907 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 KIAA1671Q9BY89 1806 aa3.3□□□□□ -1.88
USP54-206ENST00000433394 UQCRHLA0A096LP55 91 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 IGHV1-45A0A0A0MS14 117 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 IGKV2-24A0A0C4DH68 120 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 ZNF233A6NK53 670 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 MIF4GDA9UHW6 222 aaKnown RBP3.29□□□□□ -1.88
USP54-206ENST00000433394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
USP54-206ENST00000433394 KLRC4-KLRK1H3BQV0 150 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 SMLR1H3BR10 107 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 GPR75O95800 540 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 UQCRHP07919 91 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 GUSBP08236 651 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 PSKH1P11801 424 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 S100A2P29034 98 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 OMPP47874 163 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 OR10A3P58181 314 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 SNAP25P60880 206 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 MED21Q13503 144 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 SPA17Q15506 151 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 ZNHIT3Q15649 155 aaPredicted RBP3.29□□□□□ -1.88
USP54-206ENST00000433394 BRMS1LQ5PSV4 323 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 LDLRAD2Q5SZI1 272 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 TMEM136Q6ZRR5 245 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 FUNDC1Q8IVP5 155 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 C3orf22Q8N5N4 141 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 UBL4BQ8N7F7 174 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 OR2D3Q8NGH3 330 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 OR4P4Q8NGL7 312 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 RNASE11Q8TAA1 199 aaKnown RBP3.29□□□□□ -1.88
USP54-206ENST00000433394 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
USP54-206ENST00000433394 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 AP3S1Q92572 193 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 SMIM12Q96EX1 92 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 TRIB3Q96RU7 358 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 EBPLQ9BY08 206 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 TAS2R9Q9NYW1 312 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
USP54-206ENST00000433394 M0R036 132 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 KLRC4O43908 158 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 PFDN1O60925 122 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 PSMG1O95456 288 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 CRYZL1O95825 349 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 ZNF35P13682 527 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 CNTFRP26992 372 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 CAPZBP47756 277 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 STC1P52823 247 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 DLX6P56179 175 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 KLF3P57682 345 aaPredicted RBP3.28□□□□□ -1.88
USP54-206ENST00000433394 FAM53BQ14153 422 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 Q6ZQT7 251 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 ZFP82Q8N141 532 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 RPRMLQ8N4K4 120 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 FER1L6-AS1Q8NA97 138 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 OR5B17Q8NGF7 314 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 ANKRD36BP1Q96IX9 119 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 TMEM56Q96MV1 263 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 TSC22D3Q99576 134 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 EBNA1BP2Q99848 306 aaKnown RBP3.28□□□□□ -1.88
USP54-206ENST00000433394 DHRS9Q9BPW9 319 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 SHANK2-AS3Q9BTD1 123 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 FBXL15Q9H469 300 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 IMP3Q9NV31 184 aaKnown RBP3.28□□□□□ -1.88
USP54-206ENST00000433394 ASF1BQ9NVP2 202 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 GID8Q9NWU2 228 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 SLC22A13Q9Y226 551 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 BTRCQ9Y297 605 aa3.28□□□□□ -1.88
USP54-206ENST00000433394 SCN10AQ9Y5Y9 1956 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 F5H5K5 113 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 ISLRO14498 428 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 FSTL3O95633 263 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 CALB1P05937 261 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 COX5BP10606 129 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 TGFBR2P37173 567 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 C1QTNF8P60827 252 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 GTF2BQ00403 316 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 CLEC12BQ2HXU8 276 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 ZNF660Q6AZW8 331 aaPredicted RBP3.27□□□□□ -1.89
USP54-206ENST00000433394 LRRN1Q6UXK5 716 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 ZNF720Q7Z2F6 126 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 LYZL2Q7Z4W2 148 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms