RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RNF2Q99496 336 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 UBE2ZQ9H832 354 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 GDF9O60383 454 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 GPX1P07203 203 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 ARF1P84077 181 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 ATP6V1FQ16864 119 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 FBXO46Q6PJ61 603 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 OR4C5Q8NGB2 326 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 UHRF2Q96PU4 802 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CEP290O15078 2479 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CD27P26842 260 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 RAC1P63000 192 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 C1orf174Q8IYL3 243 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 IFI44Q8TCB0 444 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 FSCN3Q9NQT6 498 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 LRRC30A6NM36 301 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 S1PR2O95136 353 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 OTX2P32243 289 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 SRYQ05066 204 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 SRSF7Q16629 238 aaKnown RBP eCLIP9.71□□□□□ -0.858e-8■□□□□ 10.4
HMGCS1-202ENST00000433297 PDLIM3Q53GG5 364 aaPredicted RBP9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 ALKBH7Q9BT30 221 aaPredicted RBP9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 OR2D2Q9H210 308 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 KCNIP2Q9NS61 270 aa9.71□□□□□ -0.85
HMGCS1-202ENST00000433297 IGHV1OR15-9A0A0B4J2B8 117 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 A8MXE2 369 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 TMPRSS2O15393 492 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 SELENOTP62341 195 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 RABEPKQ7Z6M1 372 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 LYG1Q8N1E2 194 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 PARD6GQ9BYG4 376 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 C19orf25Q9UFG5 118 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 RARRES3Q9UL19 164 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 SLC45A2Q9UMX9 530 aa9.71□□□□□ -0.86
HMGCS1-202ENST00000433297 LOC102724200A0A096LPH7 203 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 A0A1W2PR77 199 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 IGLC2P0DOY2 106 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 IGLC3P0DOY3 106 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 GLB1P16278 677 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 RAC3P60763 192 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 RPL31P62899 125 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 SPATA46Q5T0L3 261 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 STRADBQ9C0K7 418 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 DOCK7Q96N67 2140 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 LRP5LA4QPB2 252 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 NKX6-3A6NJ46 265 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 KLF3P57682 345 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 RPL30P62888 115 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 FXYD3Q14802 87 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 VAMP3Q15836 100 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 ST6GALNAC3Q8NDV1 305 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 PLPPR2Q96GM1 343 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 C1QTNF5Q9BXJ0 243 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 USF3Q68DE3 2245 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 IGLV3-12A0A075B6K2 115 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 DPRXA6NFQ7 191 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 CD1BP29016 333 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 MIC13Q5XKP0 118 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 MRPL54Q6P161 138 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 VASH2Q86V25 355 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 SAXO1Q8IYX7 474 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 ZNF738Q8NE65 137 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 BORCS7Q96B45 105 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 VPS25Q9BRG1 176 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 PRRG4Q9BZD6 226 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 SERTAD4Q9NUC0 356 aa9.7□□□□□ -0.86
HMGCS1-202ENST00000433297 PSG7Q13046 419 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 WIPI1Q5MNZ9 446 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 OR10D3Q8NH80 312 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 GAL3ST2Q9H3Q3 398 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 K7EN84 100 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 RAC2P15153 192 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 SRIP30626 198 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 SLC25A45Q8N413 288 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 Q8NFD4 153 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 BET1LQ9NYM9 111 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 ANKRD30BLA7E2S9 258 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 FAM90A26D6RGX4 464 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 M0QZ24 198 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 CLDN14O95500 239 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 C3orf79P0CE67 100 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 FOXG1P55316 489 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 LTC4SQ16873 150 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 WDR74Q6RFH5 385 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 FAM234AQ9H0X4 552 aa9.69□□□□□ -0.86
HMGCS1-202ENST00000433297 FREM1Q5H8C1 2179 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms