RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CASTOR1Q8WTX7 329 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 CHPT1Q8WUD6 406 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 SECTM1Q8WVN6 248 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 AP3S1Q92572 193 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 C5orf30Q96GV9 206 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 CMTM3Q96MX0 182 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 FAM103A1Q9BTL3 118 aaKnown RBP4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR51J1Q9H342 316 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 PARP11Q9NR21 331 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 NECAP2Q9NVZ3 263 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 TAS2R8Q9NYW2 309 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 METTL1Q9UBP6 276 aaKnown RBP4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 EXTL2Q9UBQ6 330 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 SRRM4A7MD48 611 aaKnown RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 NUDT19A8MXV4 375 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 AP4M1O00189 453 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RRHO14718 337 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 KCNAB3O43448 404 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 SLC25A17O43808 307 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 NOL3O60936 208 aaKnown RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 FCGR3BO75015 233 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RBBP9O75884 186 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 CA2P00918 260 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 PPYP01298 95 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGLV2-14P01704 120 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 PF4V1P10720 104 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 VDAC1P21796 283 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 TSPAN5P62079 268 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RPL30P62888 115 aaKnown RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 CX3CL1P78423 397 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 PJVKQ0ZLH3 352 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 CBX3Q13185 183 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 CDK10Q15131 360 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ECSCRQ19T08 205 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 C2orf68Q2NKX9 166 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 TEX38Q6PEX7 206 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 NDUFA11Q86Y39 141 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 PDPNQ86YL7 162 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 C1QL4Q86Z23 238 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF645Q8N7E2 425 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR5H2Q8NGV7 314 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 WIPF2Q8TF74 440 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RAB2BQ8WUD1 216 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 TCTEX1D2Q8WW35 142 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 SNAPC3Q92966 411 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 MS4A10Q96PG2 267 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 DUX3Q96PT4 197 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ABHD1Q96SE0 405 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RNF5Q99942 180 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF2Q9BSG1 426 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 C6orf62Q9GZU0 229 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 SLC5A7Q9GZV3 580 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 MIXL1Q9H2W2 232 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 MMP27Q9H306 513 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF355PQ9NSJ1 428 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 EHFQ9NZC4 300 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 RBMX2Q9Y388 322 aaKnown RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 FBXO7Q9Y3I1 522 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 TSSC4Q9Y5U2 329 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 CEPT1Q9Y6K0 416 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 ATRQ13535 2644 aa4.53□□□□□ -1.68
HMGB3P24-201ENST00000433260 TRAV41A0A0B4J266 112 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 A0A1W2PN81 502 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 H3BMQ9 156 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 SULT1C2O00338 296 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 ARPC1BO15143 372 aaKnown RBP4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 ATP6V0E1O15342 81 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 NDUFA3O95167 84 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 CNIH1O95406 144 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 CRYZL1O95825 349 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 IGLV2-23P01705 113 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 OPN1MWP04001 364 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 APELAP0DMC3 54 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 OPN1MW2P0DN77 364 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 OPN1MW3P0DN78 364 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 HRH1P35367 487 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 CHRNA7P36544 502 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 HERV-K104P61576 105 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 FXYD3Q14802 87 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 RTL8BQ17RB0 113 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM177Q53S58 311 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM65Q6PI78 240 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 UNQ5815/PRO19632Q6UWF5 114 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 DHRS11Q6UWP2 260 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 IDO2Q6ZQW0 420 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 ZNF818PQ6ZRF7 136 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 KCTD9Q7L273 389 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 OVCH2Q7RTZ1 564 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 PPP1R27Q86WC6 154 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 TMEM17Q86X19 198 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 LAX1Q8IWV1 398 aa4.52□□□□□ -1.69
HMGB3P24-201ENST00000433260 VKORC1L1Q8N0U8 176 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms