RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PRR27Q6MZM9 219 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM252Q8N6L7 170 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 MDS2Q8NDY4 140 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 ZCCHC14Q8WYQ9 949 aaKnown RBP9.8□□□□□ -0.84
PTCH1-208ENST00000430669 CLEC7AQ9BXN2 247 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 C1QL2Q7Z5L3 287 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 RNASE6Q93091 150 aaKnown RBP9.8□□□□□ -0.84
PTCH1-208ENST00000430669 OR10C1Q96KK4 312 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 FAM169BQ8N8A8 192 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 WBP1Q96G27 269 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 NMBP08949 121 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 FAM87AP0C7U9 286 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 UCP1P25874 307 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 PSG5Q15238 335 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 OR2T10Q8NGZ9 312 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 PLCE1Q9P212 2302 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 TANC2Q9HCD6 1990 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 C3orf36Q3SXR2 165 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 NR2C2APQ86WQ0 139 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 TRAV30A0A087WSZ9 112 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 CDRT15L2A8MXV6 281 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 CYB5R3P00387 301 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-208ENST00000430669 HTR1DP28221 377 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 HIST1H3AP68431 136 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 PSG7Q13046 419 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 TAF15Q92804 592 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTCH1-208ENST00000430669 SPSB4Q96A44 273 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 LYZL4Q96KX0 146 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM56-RWDD3S4R434 201 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 ZP1P60852 638 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 MMDQ15546 238 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 BLNKQ8WV28 456 aa9.8□□□□□ -0.84
PTCH1-208ENST00000430669 SERTM2A0A1B0GWG4 89 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 COX6B1P14854 86 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 DLK1P80370 383 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 C9orf106Q8NAJ2 232 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 OR10G8Q8NGN5 311 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 OR4P4Q8NGL7 312 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
PTCH1-208ENST00000430669 LINC00312Q9Y6C7 94 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 PXMP4Q9Y6I8 212 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 HSPE1P61604 102 aaKnown RBP9.79□□□□□ -0.84
PTCH1-208ENST00000430669 C16orf82Q7Z2V1 217 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 RHOVQ96L33 236 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 NRIP2Q9BQI9 281 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 RTBDNQ9BSG5 229 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-208ENST00000430669 HIGD1AQ9Y241 93 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 BTCP35070 178 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 CEBPDP49716 269 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-208ENST00000430669 KLHDC1Q8N7A1 406 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 DRAM1Q8N682 238 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 MRPL32Q9BYC8 188 aaKnown RBP9.79□□□□□ -0.84
PTCH1-208ENST00000430669 PLSCR4Q9NRQ2 329 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 SCO1O75880 301 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 FOXL2NBQ6ZUU3 175 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 CCL19Q99731 98 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 TMUB1Q9BVT8 246 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 LPAR2Q9HBW0 351 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 CLCF1Q9UBD9 225 aa9.79□□□□□ -0.84
PTCH1-208ENST00000430669 E9PLN8 166 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 RPL27AP46776 148 aaKnown RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 VKORC1Q9BQB6 163 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 LOC105371242A0A075B767 164 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 H3BQ15 152 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 FOXH1O75593 365 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 PQLC2Q6ZP29 291 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 GDF9O60383 454 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 YPEL1O60688 119 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 SRSF10O75494 262 aaKnown RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 ZIC4Q8N9L1 334 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 OSR1Q8TAX0 266 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 YPEL2Q96QA6 119 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 KBTBD11-OT1A0A1B0GTJ5 212 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 PPIAL4GP0DN37 164 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 PDLIM4P50479 330 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 CLEC9AQ6UXN8 241 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 SSMEM1Q8WWF3 244 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM190Q8WZ59 177 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 VOPP1Q96AW1 172 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF837Q96EG3 531 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM11P17152 192 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 RAB9AP51151 201 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 MS4A7Q9GZW8 240 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-208ENST00000430669 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
PTCH1-208ENST00000430669 HLA-DRB5Q30154 266 aa9.77□□□□□ -0.84
PTCH1-208ENST00000430669 GLRX5Q86SX6 157 aa9.77□□□□□ -0.84
PTCH1-208ENST00000430669 OR10S1Q8NGN2 331 aa9.77□□□□□ -0.84
PTCH1-208ENST00000430669 PAXXQ9BUH6 204 aa9.77□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM106BQ9NUM4 274 aa9.77□□□□□ -0.84
PTCH1-208ENST00000430669 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 TRBV6-7A0A0A0MS04 114 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 AP4M1O00189 453 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms