RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 TAF15Q92804 592 aaKnown RBP eCLIP13.39□□□□□ -0.27
MBD4-203ENST00000429544 DIRC2Q96SL1 478 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 S1PR3Q99500 378 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 AIFM2Q9BRQ8 373 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 PARD6GQ9BYG4 376 aaPredicted RBP13.39□□□□□ -0.27
MBD4-203ENST00000429544 PRELID3BQ9Y3B1 194 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
MBD4-203ENST00000429544 RAB2AP61019 212 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 TLE1Q04724 770 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 HNF4GQ14541 408 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 HFEQ30201 348 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 AWAT1Q58HT5 328 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 VKORC1L1Q8N0U8 176 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 CIB3Q96Q77 187 aaPredicted RBP13.39□□□□□ -0.27
MBD4-203ENST00000429544 IDI2-AS1Q9NZ38 188 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 NDRG3Q9UGV2 375 aa13.39□□□□□ -0.27
MBD4-203ENST00000429544 SAA2-SAA4A0A096LPE2 208 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 NKX6-3A6NJ46 265 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 M0R036 132 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 GFRA3O60609 400 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
MBD4-203ENST00000429544 SAA2P0DJI9 122 aaPredicted RBP13.38□□□□□ -0.27
MBD4-203ENST00000429544 GNG10P50151 68 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 C20orf24Q9BUV8 137 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 RPS10P5Q9NQ39 176 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
MBD4-203ENST00000429544 TRGV8A0A0C4DH27 118 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 ZNF729A6NN14 1252 aaPredicted RBP13.38□□□□□ -0.27
MBD4-203ENST00000429544 PMS2P5A8MQ11 134 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 ITGB1BP1O14713 200 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 TMPRSS2O15393 492 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 IFNA17P01571 189 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 NDUFB7P17568 137 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 ERVK-16P61578 105 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 NHLH1Q02575 133 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 ICAM4Q14773 271 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 TMEM147Q9BVK8 224 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 SAP30LQ9HAJ7 183 aa13.38□□□□□ -0.27
MBD4-203ENST00000429544 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
MBD4-203ENST00000429544 RBFOX2O43251 390 aaKnown RBP eCLIP13.37□□□□□ -0.27
MBD4-203ENST00000429544 MMP23AO75900 390 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 LYG1Q8N1E2 194 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 OR4A16Q8NH70 328 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 DDB2Q92466 427 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 NEUROG1Q92886 237 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 RBMXL1Q96E39 390 aaKnown RBP13.37□□□□□ -0.27
MBD4-203ENST00000429544 SMDT1Q9H4I9 107 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
MBD4-203ENST00000429544 SERF2P84101 59 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 TMEM41BQ5BJD5 291 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 LCN15Q6UWW0 184 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 ZNF439Q8NDP4 499 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 OR10P1Q8NGE3 313 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 CLDND2Q8NHS1 167 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 EGLN1Q9GZT9 426 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 RAXQ9Y2V3 346 aa13.37□□□□□ -0.27
MBD4-203ENST00000429544 CEBPGP53567 150 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 ATP6V1FQ16864 119 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 ZNF506Q5JVG8 444 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 ZNF787Q6DD87 383 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 HIPK2Q9H2X6 1198 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 GAB2Q9UQC2 676 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 TRAV1-1A0A0B4J248 108 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 TRAV38-1A0A0B4J264 116 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 C7orf77A4D0Y5 90 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 FAM90A9PA6NNJ1 464 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 SHISA9B4DS77 424 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 SRP19P09132 144 aaKnown RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 FBP1P09467 338 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 NQO2P16083 231 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 FGF7P21781 194 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 FGF8P55075 233 aaPredicted RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 MRPS11P82912 194 aaKnown RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 CORO2AQ92828 525 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 PINX1Q96BK5 328 aaKnown RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 NGBQ9NPG2 151 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
MBD4-203ENST00000429544 SLC25A10Q9UBX3 287 aaPredicted RBP13.36□□□□□ -0.27
MBD4-203ENST00000429544 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 C15orf62A8K5M9 175 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 H7C2Y5 167 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 TFF3Q07654 80 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
MBD4-203ENST00000429544 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 TIMM9Q9Y5J7 89 aa13.35□□□□□ -0.27
MBD4-203ENST00000429544 hADV38S2A0JD32 116 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms