RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IGKV1D-33P01593 117 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 IGKV1-33P01594 117 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 HIST1H1EP10412 219 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 SRIP30626 198 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 CX3CL1P78423 397 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 EGR4Q05215 589 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 PRDX1Q06830 199 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 MYBPHQ13203 477 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 UEVLDQ8IX04 471 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF114Q8NC26 417 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 SSC4DQ8WTU2 575 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 GATAD1Q8WUU5 269 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 TAF15Q92804 592 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 HOXB13Q92826 284 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 APOBEC3DQ96AK3 386 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 RNF183Q96D59 192 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 GRAMD2BQ96HH9 432 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 GOLGA4Q13439 2230 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 BMPR1BO00238 502 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 NDUFB4O95168 129 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 CNIH1O95406 144 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 CELA3AP09093 270 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 FABP2P12104 132 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 IGFBP2P18065 325 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 F2RP25116 425 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 DRD3P35462 400 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 TRIP6Q15654 476 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 PLCXD3Q63HM9 321 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 ACSM6Q6P461 480 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 LCNL1Q6ZST4 164 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 MMD2Q8IY49 270 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 C5orf30Q96GV9 206 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR2D2Q9H210 308 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF257Q9Y2Q1 563 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 UBE2J1Q9Y385 318 aaPredicted RBP7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 LY96Q9Y6Y9 160 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 ARL2-SNX15V9GYD0 113 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 PCNX3Q9H6A9 2034 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 ATG2BQ96BY7 2078 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A1W2PPV4 95 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 M0R2Z0 102 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC16A7O60669 478 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 NAPSAO96009 420 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 CPMP14384 443 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 GPR12P47775 334 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 FXYD4P59646 89 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 C2orf27AQ580R0 203 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC23A3Q6PIS1 610 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 ADAMTSL4Q6UY14 1074 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 RNF144BQ7Z419 303 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 FGF14Q92915 247 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPANXB1Q9NS25 103 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 DEC1Q9P2X7 70 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF391Q9UJN7 358 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 HSPB8Q9UJY1 196 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 CYSLTR1Q9Y271 337 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 UFC1Q9Y3C8 167 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 ALPK2Q86TB3 2170 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 MPDZO75970 2070 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 IGKV1-8A0A0C4DH67 115 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 LOC101059948A0A1B0GTJ6 334 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 F8W1H4 67 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 ISLRO14498 428 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 FABP6P51161 128 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 C2orf91Q6ZV80 131 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 TTC9CQ8N5M4 171 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPACA5Q96QH8 159 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 CITED1Q99966 193 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 SCN3AQ9NY46 2000 aa7.48□□□□□ -1.21
CDC42BPA-206ENST00000429440 VWC2LB2RUY7 222 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 NUDT14O95848 222 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SP9P0CG40 484 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 COX8AP10176 69 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 TNXAQ16473 311 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OTPQ5XKR4 325 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 ADAMTSL5Q6ZMM2 481 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF841Q6ZN19 808 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 DOK3Q7L591 496 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR1F12Q8NHA8 337 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 PBOV1Q9GZY1 135 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 WDR54Q9H977 334 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SERTAD4Q9NUC0 356 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SIGLEC8Q9NYZ4 499 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR1A2Q9Y585 309 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 TRBV20OR9-2A0A075B6H5 130 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 hCG_38984A0A1B0GV85 526 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC31A1O15431 190 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR9G9P0C7N8 305 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 ATXN8OSP0DMR3 200 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 HERV-K104P61576 105 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 TLE1Q04724 770 aa7.47□□□□□ -1.21
CDC42BPA-206ENST00000429440 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms