RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IAPPP10997 89 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 ZNF83P51522 516 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 SERF2P84101 59 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 UNC119Q13432 240 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 MRAP2Q96G30 205 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
SYNGAP1-203ENST00000428982 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 ACP1P24666 158 aa12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 RHOGP84095 191 aa12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.43
SYNGAP1-203ENST00000428982 MDC1Q14676 2089 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 MAP1BP46821 2468 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 A0A0G2JMM0 328 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 A0A1W2PPB8 328 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 KIR3DP1A8MWS1 328 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 NEURL1O76050 574 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 GDF1P27539 372 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 PIGTQ969N2 578 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 M0R135 149 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 RP1P56715 2156 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 LINC00696Q6ZRV3 163 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF391Q9UJN7 358 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 PSG11Q9UQ72 335 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 PRR33A8MZF0 331 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 MS4A18H0YCH9 400 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 MT-ND6P03923 174 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 CLDN15P56746 228 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 UBE2G1P62253 170 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 MS4A18Q3C1V0 323 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 PSENENQ9NZ42 101 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 TAAR3PQ9P1P4 343 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 SS18L2Q9UHA2 77 aa12.33□□□□□ -0.44
SYNGAP1-203ENST00000428982 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 IGKV3D-11A0A0A0MRZ8 115 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 CRYAAP02489 173 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 TMEM187Q14656 261 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 SPAARA0A1B0GVQ0 90 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 SRIP30626 198 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 COX19Q49B96 90 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 LCN12Q6JVE5 192 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 PPOXP50336 477 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
SYNGAP1-203ENST00000428982 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 CXorf66Q5JRM2 361 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF324BQ6AW86 544 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 CT55Q8WUE5 264 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 ANXA10Q9UJ72 324 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 FANCMQ8IYD8 2048 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 SLC22A20A6NK97 555 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 BMPR1BO00238 502 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 DHHO43323 396 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 ANOS1P23352 680 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 SSBP4Q9BWG4 385 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 DMRTC1Q5HYR2 192 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 MUC15Q8N387 334 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 FAM222BQ8WU58 562 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 SARAFQ96BY9 339 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 AGMATQ9BSE5 352 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 ST20Q9HBF5 79 aa12.31□□□□□ -0.44
SYNGAP1-203ENST00000428982 ETV2O00321 342 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 NDUFB4O95168 129 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 TIAF1O95411 115 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF841Q6ZN19 808 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 MRPL21Q7Z2W9 205 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 CTXND1A0A1B0GTU2 59 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 SLC17A3O00476 420 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 LGALS7P47929 136 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 RAB40CQ96S21 281 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 CNOT1A5YKK6 2376 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 LINC00869P0C866 280 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 C1orf122Q6ZSJ8 110 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 C6orf201Q7Z4U5 140 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 A0A1W2PNR3 127 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR4C46A6NHA9 309 aa12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 LMX1BO60663 402 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms