RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RIMS4Q9H426 269 aaPredicted RBP7.74□□□□□ -1.17
HMGCLL1-206ENST00000428842 TAS2R3Q9NYW6 316 aa7.74□□□□□ -1.17
HMGCLL1-206ENST00000428842 TRAV40A0A0B4J280 105 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 C5orf51A6NDU8 294 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 H0YIZ8 118 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 F2RL2O00254 374 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 APOC3P02656 99 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 IGKV1-16P04430 117 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 LIPFP07098 398 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 KCNJ3P48549 501 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 ZNF816Q0VGE8 651 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 TMEM249Q2WGJ8 235 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 NCR3LG1Q68D85 454 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 LY6G5BQ8NDX9 201 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 BPIFCQ8NFQ6 507 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 TNFRSF14Q92956 283 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 ABHD14AQ9BUJ0 271 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 TNFRSF19Q9NS68 423 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 UBE2J1Q9Y385 318 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 TET2Q6N021 2002 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 IGHV2-70DA0A0C4DH43 119 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 ZNF729A6NN14 1252 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 C17orf98A8MV24 154 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 TOX4O94842 621 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 HNF4GQ14541 408 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 SSX2Q16385 188 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 CR1LQ2VPA4 569 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 FAM122CQ6P4D5 195 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 SSX9Q7RTT3 188 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 ZNF439Q8NDP4 499 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 RTN4IP1Q8WWV3 396 aaPredicted RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 DCUN1D4Q92564 292 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 MARC2Q969Z3 335 aa7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 RRNAD1Q96FB5 475 aaKnown RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 FBN1P35555 2871 aaKnown RBP7.73□□□□□ -1.17
HMGCLL1-206ENST00000428842 C13orf42A0A1B0GVH6 325 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 M0R1X1 148 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 TOR1AO14656 332 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 GOSR1O95249 250 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 ARG1P05089 322 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MSMBP08118 114 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 IGHV4-31P0DP07 118 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 TPT1P13693 172 aaKnown RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MMP9P14780 707 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MYOD1P15172 320 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 IL15RAQ13261 267 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 PRSS54Q6PEW0 395 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 Q6ZS49 121 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 BCL6BQ8N143 479 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 CORO2AQ92828 525 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 DUX5Q96PT3 197 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 ZNF251Q9BRH9 671 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 TMEM133Q9H2Q1 129 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 GAL3ST2Q9H3Q3 398 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 C7orf69Q9H7B7 122 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 PGLYRP1O75594 196 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 DIRAS3O95661 229 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 HOXB5P09067 269 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 CNTFRP26992 372 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 GPR12P47775 334 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 PAX5Q02548 391 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 SURF2Q15527 256 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 ABCA11PQ4W5N1 156 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 OR10X1Q8NGY0 326 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 BEX4Q9NWD9 120 aaPredicted RBP7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 NSG2Q9Y328 171 aa7.72□□□□□ -1.17
HMGCLL1-206ENST00000428842 A0A0G2JRQ6 117 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 SH2D7A6NKC9 451 aaPredicted RBP7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 NUDT19A8MXV4 375 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 J3QR06 171 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 DVL1P1P54792 670 aaPredicted RBP7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 SRSF2Q01130 221 aaKnown RBP7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 LYZL2Q7Z4W2 148 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 OR4P4Q8NGL7 312 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 C2orf50Q96LR7 162 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 AQP10Q96PS8 301 aa7.71□□□□□ -1.17
HMGCLL1-206ENST00000428842 IGKV1-39P01597 117 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 IGKV1D-39P04432 117 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 FAM157CP0CG43 387 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 PAX1P15863 534 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 HTD2P86397 168 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 SPINK9Q5DT21 86 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 KLF17Q5JT82 389 aaPredicted RBP7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 C10orf91Q5T1B1 145 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 ZNF383Q8NA42 475 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 GLYATL2Q8WU03 294 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 TCTEX1D2Q8WW35 142 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 OR10C1Q96KK4 312 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 RSRP1Q9BUV0 290 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 NKX6-2Q9C056 277 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms