RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 LGALS7P47929 136 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 PHB2Q99623 299 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 RANGRFQ9HD47 186 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-209ENST00000428728 COA4Q9NYJ1 87 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 STAB2Q8WWQ8 2551 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 SRRM4A7MD48 611 aaKnown RBP13.09□□□□□ -0.31
TRIM39-209ENST00000428728 C3orf84H3BNL1 204 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 CRYZL1O95825 349 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 HSPA13P48723 471 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 TMEM177Q53S58 311 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 C22orf42Q6IC83 251 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 IDO2Q6ZQW0 420 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 ANKRD13BQ86YJ7 626 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 ATG5Q9H1Y0 275 aa13.09□□□□□ -0.31
TRIM39-209ENST00000428728 ELF5Q9UKW6 265 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-209ENST00000428728 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 J3QRK9 145 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 DIRAS3O95661 229 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.32
TRIM39-209ENST00000428728 TNXAQ16473 311 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 VMA21Q3ZAQ7 101 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-209ENST00000428728 MUC7Q8TAX7 377 aa13.08□□□□□ -0.32
TRIM39-209ENST00000428728 TINAGL1Q9GZM7 467 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-209ENST00000428728 TRDV1A0A1B0GX56 115 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 LINC00473A8K010 186 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 IGLV1-51P01701 117 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 TRBV12-3P01733 135 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 RRASP10301 218 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 DUTP33316 252 aaKnown RBP13.07□□□□□ -0.32
TRIM39-209ENST00000428728 SYNJ2BPP57105 145 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 MRGPRG-AS1Q2M3A8 158 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 ACOT12Q8WYK0 555 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 DDB2Q92466 427 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 ZMAT4Q9H898 229 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 ADAM30Q9UKF2 790 aa13.07□□□□□ -0.32
TRIM39-209ENST00000428728 MSGN1A6NI15 193 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 MPPED1O15442 326 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 DYRK1AQ13627 763 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 OR9G4Q8NGQ1 327 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
TRIM39-209ENST00000428728 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
TRIM39-209ENST00000428728 RBMXL2O75526 392 aaKnown RBP13.05□□□□□ -0.32
TRIM39-209ENST00000428728 AADACP22760 399 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 DTYMKP23919 212 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 UBE2KP61086 200 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-209ENST00000428728 PRSS8Q16651 343 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 ZNF343Q6P1L6 599 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 Q6ZS49 121 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 TEX45Q8NA69 505 aa13.05□□□□□ -0.32
TRIM39-209ENST00000428728 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
TRIM39-209ENST00000428728 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
TRIM39-209ENST00000428728 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-209ENST00000428728 NFYAP23511 347 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-209ENST00000428728 PSMB9P28065 219 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 GABARAPL2P60520 117 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 RPEL1Q2QD12 228 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 CDNFQ49AH0 187 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 C10orf55Q5SWW7 151 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 CASC10Q5T4H9 136 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 SGPP2Q8IWX5 399 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 Q8N1Y9 231 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
TRIM39-209ENST00000428728 OSR1Q8TAX0 266 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-209ENST00000428728 NUDCD2Q8WVJ2 157 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 ST6GALNAC5Q9BVH7 336 aa13.04□□□□□ -0.32
TRIM39-209ENST00000428728 ZNF430Q9H8G1 570 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-209ENST00000428728 TMEM235A6NFC5 223 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 FCGR3BO75015 233 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 PRH1P02810 166 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 GALP22466 123 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
TRIM39-209ENST00000428728 ARL6IP1Q15041 203 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 ZNF645Q8N7E2 425 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 RAB26Q9ULW5 256 aa13.03□□□□□ -0.32
TRIM39-209ENST00000428728 NOTOA8MTQ0 251 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 TUSC2O75896 110 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 ACTL6BO94805 426 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 BRI3O95415 125 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 RHOGP84095 191 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 CDK10Q15131 360 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 IL34Q6ZMJ4 242 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 LGALS14Q8TCE9 139 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 TM2D3Q9BRN9 247 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 AKIP1Q9NQ31 210 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 TXNL4BQ9NX01 149 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms