RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 DYRK1AQ13627 763 aa11.85□□□□□ -0.51
SEC13-210ENST00000428626 TBCEQ15813 527 aaPredicted RBP11.85□□□□□ -0.51
SEC13-210ENST00000428626 OR10J5Q8NHC4 309 aa11.85□□□□□ -0.51
SEC13-210ENST00000428626 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
SEC13-210ENST00000428626 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
SEC13-210ENST00000428626 RANGRFQ9HD47 186 aaPredicted RBP11.85□□□□□ -0.51
SEC13-210ENST00000428626 TRAV1-2A0A0B4J238 106 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 C13orf42A0A1B0GVH6 325 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 SMIM30A4D0T7 59 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 CD40LGP29965 261 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 IDO2Q6ZQW0 420 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 H1FOOQ8IZA3 346 aaPredicted RBP11.84□□□□□ -0.51
SEC13-210ENST00000428626 LYSTQ99698 3801 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 C19orf73Q9NVV2 129 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
SEC13-210ENST00000428626 SHOXO15266 292 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 BRI3O95415 125 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 DIRAS3O95661 229 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 RAB6AP20340 208 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.52
SEC13-210ENST00000428626 PSMD7P51665 324 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 ZNF367Q7RTV3 350 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 ADAD2Q8NCV1 583 aaKnown RBP11.83□□□□□ -0.52
SEC13-210ENST00000428626 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 THAP7Q9BT49 309 aaPredicted RBP11.83□□□□□ -0.52
SEC13-210ENST00000428626 ELOVL1Q9BW60 279 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 NDUFB11Q9NX14 153 aa11.83□□□□□ -0.52
SEC13-210ENST00000428626 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 J3QRK9 145 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 PRH1P02810 166 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 ZP3P21754 424 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 MRPS15P82914 257 aaKnown RBP11.82□□□□□ -0.52
SEC13-210ENST00000428626 ZNF45Q02386 682 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 PRSS8Q16651 343 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 C22orf42Q6IC83 251 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 IZUMO2Q6UXV1 221 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 Q6ZS49 121 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 ANKRD13BQ86YJ7 626 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 OR9G4Q8NGQ1 327 aa11.82□□□□□ -0.52
SEC13-210ENST00000428626 A0A0G2JLM5 398 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 A8MZ25 164 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 PDCD5O14737 125 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 CRYZL1O95825 349 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 CSN3P07498 182 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 RAB3BP20337 219 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 GADD45AP24522 165 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 UBE2KP61086 200 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 CITED4Q96RK1 184 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 GINS4Q9BRT9 223 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 COA4Q9NYJ1 87 aa11.81□□□□□ -0.52
SEC13-210ENST00000428626 PEF1Q9UBV8 284 aaKnown RBP11.81□□□□□ -0.52
SEC13-210ENST00000428626 IGLV2-14P01704 120 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 SAA1P0DJI8 122 aaPredicted RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 TAGLNQ01995 201 aaKnown RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 ARFRP1Q13795 201 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 TNXAQ16473 311 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 ADAMTSL5Q6ZMM2 481 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 ZMAT4Q9H898 229 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 ZNF430Q9H8G1 570 aaPredicted RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 AKIP1Q9NQ31 210 aa11.8□□□□□ -0.52
SEC13-210ENST00000428626 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
SEC13-210ENST00000428626 IGKV1D-13A0A0B4J2D9 117 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 IGKV1-13P0DP09 117 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 RRASP10301 218 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 NFYAP23511 347 aaPredicted RBP11.79□□□□□ -0.52
SEC13-210ENST00000428626 MYL9P24844 172 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 MECP2P51608 486 aaKnown RBP11.79□□□□□ -0.52
SEC13-210ENST00000428626 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 C19orf35Q6ZS72 473 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 NUDCD2Q8WVJ2 157 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 PHB2Q99623 299 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
SEC13-210ENST00000428626 TRBV9A0A0B4J1U6 114 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 BMPR1BO00238 502 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 AADACP22760 399 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 DTYMKP23919 212 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 TALDO1P37837 337 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 RANBP1P43487 201 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 RHOGP84095 191 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 CBX3Q13185 183 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 VMA21Q3ZAQ7 101 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
SEC13-210ENST00000428626 VKORC1L1Q8N0U8 176 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms