RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 IGKV3-20P01619 116 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 NGFRP08138 427 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 APOBEC3AP31941 199 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 TCF24Q7RTU0 167 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 H1FOOQ8IZA3 346 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 ZNF729A6NN14 1252 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 ERGP11308 486 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 FABP2P12104 132 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 CD81P60033 236 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 VN1R17PQ8TDU5 208 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 TNFSF18Q9UNG2 199 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 TRAV20A0A0B4J274 112 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 OR4C45A6NMZ5 311 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 SEC11BP0C7V7 166 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 FAM168AQ92567 244 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 BRWD1Q9NSI6 2320 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 ODAMA1E959 279 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 SNRPCP09234 159 aaKnown RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 COL5A1-AS1Q5SY13 56 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 ADAD2Q8NCV1 583 aaKnown RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 LINC01560Q8TB33 94 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 DUX3Q96PT4 197 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 C2orf88Q9BSF0 95 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 PKIBQ9C010 78 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 AURKAIP1Q9NWT8 199 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 PCM1Q15154 2024 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 PCOLCEQ15113 449 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 TGIF1Q15583 401 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 PQLC2Q6ZP29 291 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 NEU4Q8WWR8 484 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 TMEM45BQ96B21 275 aa7.69□□□□□ -1.18
CTNND1-208ENST00000428599 SLIRPQ9GZT3 109 aaKnown RBP7.69□□□□□ -1.18
CTNND1-208ENST00000428599 A0A1W2PR77 199 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A10PA6NDY2 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A18PA6NE21 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A16PA6NEW6 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A20PA6NIJ5 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A8PA6NJQ4 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A7PA6NKC0 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A22PA8MWA6 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A12PA8MX19 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A5PA8MXJ8 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A23PA8MXZ1 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 GHRHP01286 108 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A15PP0C7V4 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A13PP0C7W8 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A14PP0C7W9 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM90A24PP0C7X0 464 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 FAM3BP58499 235 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-208ENST00000428599 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 JPT1Q9UK76 154 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 A0A1W2PQM1 296 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 VSIG10L2P0DP72 767 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 EMP1P54849 157 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 ZNF826PQ6ZT77 177 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 RHOVQ96L33 236 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 NEU1Q99519 415 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 HDHD3Q9BSH5 251 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-208ENST00000428599 RBKSQ9H477 322 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 DNAJC4Q9NNZ3 241 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 SEC16AO15027 2179 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 LNP1A1A4G5 178 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 ATP6V0CP27449 155 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 SPOCK3Q9BQ16 436 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 NRIP2Q9BQI9 281 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 C9JCJ5 164 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 CD69Q07108 199 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 PSME4Q14997 1843 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 H3BRM9 83 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 BCL2P10415 239 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 NCMAPQ5T1S8 102 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 UBE2DNLQ8IWF7 75 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 MARVELD1Q9BSK0 173 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 SSBP3Q9BWW4 388 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-208ENST00000428599 OR51M1Q9H341 326 aa7.68□□□□□ -1.18
CTNND1-208ENST00000428599 TRBV5-3A0A0A0MS03 114 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 FBLL1A6NHQ2 334 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 AMY1AP04745 511 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 C10orf111Q8N326 155 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 A0A087X0M5 115 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 A0A1B0GX30 115 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 A0A1W2PRX2 142 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 IGKV1D-16P01601 117 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 TDGF1P13385 188 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 HSPE1P61604 102 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 NRN1LQ496H8 165 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 OR51G1Q8NGK1 321 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 SRSF12Q8WXF0 261 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 MS4A3Q96HJ5 214 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 VGLL1Q99990 258 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 WNT5BQ9H1J7 359 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 DICER1Q9UPY3 1922 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 TRGV2A0A075B6R0 118 aa7.67□□□□□ -1.18
CTNND1-208ENST00000428599 RBMY1BA6NDE4 496 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 RBMY1EA6NEQ0 496 aaKnown RBP7.67□□□□□ -1.18
CTNND1-208ENST00000428599 RBMY1DP0C7P1 496 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms