RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MRPS11P82912 194 aaKnown RBP8.57□□□□□ -1.04
HDAC9-210ENST00000428307 HAPLN4Q86UW8 402 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 PIP4P2Q8N4L2 257 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 LRRC46Q96FV0 321 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 PRELID3BQ9Y3B1 194 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 FBXO7Q9Y3I1 522 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 PKD1L2Q7Z442 2459 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 IGHV1-69-2A0A0G2JMI3 117 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 NUDT19A8MXV4 375 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 F8W036 122 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 IFNA5P01569 189 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 ADCYAP1P18509 176 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 TAGLNQ01995 201 aaKnown RBP8.56□□□□□ -1.04
HDAC9-210ENST00000428307 TMEM200BQ69YZ2 307 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 LILRB2Q8N423 598 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 SUN5Q8TC36 379 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 CORO2AQ92828 525 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 UQCC1Q9NVA1 299 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 RNASEK-C17orf49H0YIS7 233 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 DVL1O14640 695 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 NDUFB3O43676 98 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 DFFBO76075 338 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-210ENST00000428307 IFNA17P01571 189 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 RAB5CP51148 216 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 EFNB3Q15768 340 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 DTD1Q8TEA8 209 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 TSNAXQ99598 290 aaKnown RBP8.56□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF251Q9BRH9 671 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 RSG1Q9BU20 258 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 QTRT1Q9BXR0 403 aaKnown RBP8.56□□□□□ -1.04
HDAC9-210ENST00000428307 PRORYQ9H606 182 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 RPUSD1Q9UJJ7 312 aaKnown RBP8.56□□□□□ -1.04
HDAC9-210ENST00000428307 ARFGEF3Q5TH69 2177 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 DCHS2Q6V1P9 2916 aa8.56□□□□□ -1.04
HDAC9-210ENST00000428307 DOCK11Q5JSL3 2073 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
HDAC9-210ENST00000428307 TRAV3A0A0B4J244 114 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 C9JQL5 133 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 GPR37O15354 613 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 TAS2R30P59541 319 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 HBG1P69891 147 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 HBG2P69892 147 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 GUCA2BQ16661 112 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 HFEQ30201 348 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 LRRC10Q5BKY1 277 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF439Q8NDP4 499 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 GNPNAT1Q96EK6 184 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-210ENST00000428307 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 COL8A2P25067 703 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF525Q8N782 197 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF383Q8NA42 475 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 OR4A16Q8NH70 328 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 SCGB1C1Q8TD33 95 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF714Q96N38 554 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 OR4C12Q96R67 309 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
HDAC9-210ENST00000428307 GAL3ST2Q9H3Q3 398 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 LINC00574Q9H8X3 128 aa8.55□□□□□ -1.04
HDAC9-210ENST00000428307 STRAPQ9Y3F4 350 aaKnown RBP8.55□□□□□ -1.04
HDAC9-210ENST00000428307 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 TACC2O95359 2948 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 ITGB1BP1O14713 200 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 LY6HO94772 140 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 NQO2P16083 231 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 SNCAP37840 140 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 ERVK-16P61578 105 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 MEF2CQ06413 473 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF672Q499Z4 452 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 TMEM14EPQ6UXP3 125 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 DDB2Q92466 427 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 UMAD1C9J7I0 102 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 CD5P06127 495 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 DVL1P1P54792 670 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 CCL20P78556 96 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 AKR1C8PQ5T2L2 129 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
HDAC9-210ENST00000428307 OR4S2Q8NH73 311 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 FAM216AQ8WUB2 273 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 RHOVQ96L33 236 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 TMEM140Q9NV12 185 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 HIVEP3Q5T1R4 2406 aa8.54□□□□□ -1.04
HDAC9-210ENST00000428307 SPTAN1Q13813 2472 aaKnown RBP8.53□□□□□ -1.04
HDAC9-210ENST00000428307 UBE2L5PA0A1B0GUS4 154 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 M6PRP20645 277 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 REG1BP48304 166 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 PPT1P50897 306 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 HEPN1Q6WQI6 88 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms