RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 J3QT63 122 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 WDR86Q86TI4 376 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
CNTN4-206ENST00000427741 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 WIPI2Q9Y4P8 454 aa12.51□□□□□ -0.41
CNTN4-206ENST00000427741 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 TRAV38-1A0A0B4J264 116 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 SIAH2O43255 324 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 FRMD6-AS1P0C7T7 363 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
CNTN4-206ENST00000427741 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 FOLR3P41439 243 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 MIEN1Q9BRT3 115 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
CNTN4-206ENST00000427741 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 CD82P27701 267 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 GNG10P50151 68 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 LINC00310P59036 64 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
CNTN4-206ENST00000427741 IFI44Q8TCB0 444 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 SERF1AO75920 110 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 UBE2NP61088 152 aaKnown RBP12.49□□□□□ -0.41
CNTN4-206ENST00000427741 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
CNTN4-206ENST00000427741 SPATA46Q5T0L3 261 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 BTF3L4Q96K17 158 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
CNTN4-206ENST00000427741 M0QZK8 103 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 SERPINA7P05543 415 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 ARR3P36575 388 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 LHX2P50458 406 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
CNTN4-206ENST00000427741 Q6ZVH6 145 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 C11orf42Q8N5U0 333 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 PI4KAP42356 2102 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 VAMP8Q9BV40 100 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
CNTN4-206ENST00000427741 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
CNTN4-206ENST00000427741 TNFSF13O75888 250 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 CELA3AP09093 270 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 MMDQ15546 238 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 PPP1R32Q7Z5V6 425 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 SCCPDHQ8NBX0 429 aa12.48□□□□□ -0.41
CNTN4-206ENST00000427741 PHF7Q9BWX1 381 aaPredicted RBP12.48□□□□□ -0.41
CNTN4-206ENST00000427741 PLP2Q04941 152 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 TEX43Q6ZNM6 134 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 FOXJ2Q9P0K8 574 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 MT-CO3P00414 261 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 OTX2P32243 289 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 LINC00205P59089 165 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 SELENOTP62341 195 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 OR52L2PQ8NGH6 319 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
CNTN4-206ENST00000427741 C20orf144Q9BQM9 153 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
CNTN4-206ENST00000427741 TRAV34A0A0B4J273 112 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 C15orf62A8K5M9 175 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 K7ESF4 209 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 SLC17A3O00476 420 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 SPINK4O60575 86 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 CLDN14O95500 239 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 IL6RP08887 468 aaPredicted RBP12.46□□□□□ -0.41
CNTN4-206ENST00000427741 CEBPDP49716 269 aaPredicted RBP12.46□□□□□ -0.41
CNTN4-206ENST00000427741 EDDM3BP56851 147 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 CLDN18P56856 261 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 KRTDAPP60985 99 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 TGFBR3Q03167 851 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 GAGE1Q13065 139 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 SPINK14Q6IE38 97 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 MCEMP1Q8IX19 187 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 RAB1CQ92928 201 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 C12orf77C9JDV5 145 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 F6UZH7 168 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
CNTN4-206ENST00000427741 RAB7AP51149 207 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 BAGE3Q86Y29 109 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 BAGE2Q86Y30 109 aa12.46□□□□□ -0.41
CNTN4-206ENST00000427741 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 RAB29O14966 203 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 PSPNO60542 156 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 TIMP3P35625 211 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 CYB561P49447 251 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 ZNF146Q15072 292 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 TMEM183BQ1AE95 376 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 APH1AQ96BI3 265 aa12.46□□□□□ -0.42
CNTN4-206ENST00000427741 CDIPTO14735 213 aa12.45□□□□□ -0.42
CNTN4-206ENST00000427741 NXPH2O95156 264 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms