RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 A0A1B0GW64 132 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 BTBD17A6NE02 478 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 ERVK-16P61578 105 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 CORO2AQ92828 525 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 RARRES2Q99969 163 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 PSMG3Q9BT73 122 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 GAB2Q9UQC2 676 aa11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
APOBEC3D-202ENST00000427494 HCFC1P51610 2035 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 E7EQL1 145 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 GNG10P50151 68 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 C1orf87Q8N0U7 546 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 DYNLRB1Q9NP97 96 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 SLC25A10Q9UBX3 287 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 hADV38S2A0JD32 116 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 FAM90A9PA6NNJ1 464 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 MMP23AO75900 390 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 RAB2AP61019 212 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR4A16Q8NH70 328 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR4S2Q8NH73 311 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 DDB2Q92466 427 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 CCL17Q92583 94 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 RNASE6Q93091 150 aaKnown RBP11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
APOBEC3D-202ENST00000427494 PCNX1Q96RV3 2341 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 PPIAL4EA0A075B759 164 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 FAM90A27PA6NNH2 459 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 PPIAL4DF5H284 164 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 IFNA17P01571 189 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 HBE1P02100 147 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 PPIAL4FP0DN26 164 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 NQO2P16083 231 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 CA7P43166 264 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 ATP6V1FQ16864 119 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 AKIRIN2Q53H80 203 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR10P1Q8NGE3 313 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM147Q9BVK8 224 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 PPIAL4AQ9Y536 164 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
APOBEC3D-202ENST00000427494 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR13C7P0DN81 318 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 THBS3P49746 956 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 KLRB1Q12918 225 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 HAGHQ16775 308 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM30BQ3MIR4 351 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 RPRMQ9NS64 109 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM140Q9NV12 185 aa11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.56
APOBEC3D-202ENST00000427494 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 CD3EP07766 207 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 SERF2P84101 59 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 LINC01560Q8TB33 94 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 RBMXL1Q96E39 390 aaKnown RBP11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 SMDT1Q9H4I9 107 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 DOCK11Q5JSL3 2073 aa11.52□□□□□ -0.57
APOBEC3D-202ENST00000427494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 CCL21O00585 134 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 SPCS3P61009 180 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 HNF4GQ14541 408 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 AARDQ4LEZ3 155 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 TMEM41BQ5BJD5 291 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 ST6GALNAC3Q8NDV1 305 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 GAL3ST2Q9H3Q3 398 aa11.51□□□□□ -0.57
APOBEC3D-202ENST00000427494 TRAV3A0A0B4J244 114 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 FGF7P21781 194 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 RELBQ01201 579 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms