RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 GPHA2Q96T91 129 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 LIN7CQ9NUP9 197 aaKnown RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 KCNIP3Q9Y2W7 256 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 A0A0A6YYJ9 748 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 HOXA3O43365 443 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 FCGR3BO75015 233 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 MOSP00540 346 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 IGKV1D-33P01593 117 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 IGKV1-33P01594 117 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 IGHV4-59P01825 116 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 SNRNP70P08621 437 aaKnown RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 CD24P25063 80 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 TAS2R31P59538 309 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 HES1Q14469 280 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 AKAP14Q86UN6 197 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 FLYWCH2Q96CP2 140 aaKnown RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 ALX4Q9H161 411 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-204ENST00000427239 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
COL11A1-204ENST00000427239 C3orf85A0A1B0GTC6 90 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 CRYM-AS1A6NIL9 109 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 PTTG1O95997 202 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 AKR1C4P17516 323 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 UBE2MP61081 183 aaKnown RBP12.36□□□□□ -0.43
COL11A1-204ENST00000427239 SLC25A42Q86VD7 318 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
COL11A1-204ENST00000427239 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 EAF1Q96JC9 268 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-204ENST00000427239 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 NUDT15Q9NV35 164 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 TCF19Q9Y242 345 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 CUBNO60494 3623 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 NF1P21359 2839 aa12.36□□□□□ -0.43
COL11A1-204ENST00000427239 CLDN34H7C241 214 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 RGS13O14921 159 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 LGALS7P47929 136 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 HILS1P60008 231 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 PLET1Q6UQ28 207 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 OR8H1Q8NGG4 311 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 OSR1Q8TAX0 266 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-204ENST00000427239 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
COL11A1-204ENST00000427239 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
COL11A1-204ENST00000427239 HPRT1P00492 218 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 TMEM11P17152 192 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 DHODHQ02127 395 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 HNF4GQ14541 408 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 TMEM230Q96A57 120 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 A6NDX4 124 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 H0Y980 276 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 CRYZL1O95825 349 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 IFNA2P01563 188 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 SERPINE2P07093 398 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 ANXA3P12429 323 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 RPA2P15927 270 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
COL11A1-204ENST00000427239 RAG2P55895 527 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 RPS16P62249 146 aaKnown RBP12.34□□□□□ -0.43
COL11A1-204ENST00000427239 SLC9A3R2Q15599 337 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 OR2B11Q5JQS5 317 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 C16orf82Q7Z2V1 217 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 Q8N6K4 173 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
COL11A1-204ENST00000427239 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 RAB18Q9NP72 206 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 C1RLQ9NZP8 487 aa12.34□□□□□ -0.43
COL11A1-204ENST00000427239 TRAV6A0A075B6T7 132 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 TCF21O43680 179 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 RAMP3O60896 148 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 TSNAXQ99598 290 aaKnown RBP12.33□□□□□ -0.44
COL11A1-204ENST00000427239 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
COL11A1-204ENST00000427239 SETD2Q9BYW2 2564 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-204ENST00000427239 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 SHOXO15266 292 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 PEX14O75381 377 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 OR2F2O95006 317 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 HRASP01112 189 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 OR4E1P0C645 316 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 SUPT4H1P63272 117 aaKnown RBP12.32□□□□□ -0.44
COL11A1-204ENST00000427239 LY6EQ16553 131 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
COL11A1-204ENST00000427239 CCBE1Q6UXH8 406 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-204ENST00000427239 SLC7A5P1Q8MH63 180 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms