RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TTC9CQ8N5M4 171 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 PRDM14Q9GZV8 571 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 AQP3Q92482 292 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 FMC1Q96HJ9 113 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 hCG_38984A0A1B0GV85 526 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 A0A1W2PPC1 479 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 ARF6P62330 175 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 CACNG7P62955 275 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 CISD3P0C7P0 127 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 RGP1Q92546 391 aaPredicted RBP12.48□□□□□ -0.41
PTPN13-203ENST00000427191 B4E171 279 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 C1orf185Q5T7R7 199 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 HDHD3Q9BSH5 251 aaPredicted RBP12.47□□□□□ -0.41
PTPN13-203ENST00000427191 R4GN57 208 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 PAX1P15863 534 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
PTPN13-203ENST00000427191 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 UCP3P55916 312 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 SPTA1P02549 2419 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 CT62P0C5K7 136 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 RHOVQ96L33 236 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 PGPA6NDG6 321 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 C9orf172C9J069 976 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 ZNF79Q15937 498 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 HOXA5P20719 270 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 FAM71F2Q6NXP2 309 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
PTPN13-203ENST00000427191 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.41
PTPN13-203ENST00000427191 HIKESHIQ53FT3 197 aa12.46□□□□□ -0.41
PTPN13-203ENST00000427191 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
PTPN13-203ENST00000427191 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
PTPN13-203ENST00000427191 LRP5O75197 1615 aa12.46□□□□□ -0.41
PTPN13-203ENST00000427191 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.41
PTPN13-203ENST00000427191 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
PTPN13-203ENST00000427191 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.41
PTPN13-203ENST00000427191 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 CNTFRP26992 372 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 TRBV5-5A0A0J9YX44 114 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 UCP2P55851 309 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 KCNS1Q96KK3 526 aa12.46□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 PGFP49763 221 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 MBNL2Q5VZF2 373 aaKnown RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 C8orf82Q6P1X6 216 aaPredicted RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 PRSS41Q7RTY9 318 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 LINC00470Q9BZP3 86 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 PRR13Q9NZ81 148 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 STRCP1A6NGW2 1772 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 COX5BP10606 129 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 NPPCP23582 126 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF660Q6AZW8 331 aaPredicted RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 TMEM50AO95807 157 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 A0A087WWC5 75 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 PRR33A8MZF0 331 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 CEACAM4O75871 244 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 CXCL2P19875 107 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 RIPPLY2Q5TAB7 128 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 INTS1Q8N201 2190 aaKnown RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 TRBV5-3A0A0A0MS03 114 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 FCGR2BP31994 310 aaPredicted RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 PPP1R3EQ9H7J1 279 aa12.45□□□□□ -0.42
PTPN13-203ENST00000427191 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
PTPN13-203ENST00000427191 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 NPIPB13A6NJU9 1138 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 NPIPB4C9JG80 1138 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 PATE4P0C8F1 98 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 ZFP36L2P47974 494 aaKnown RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 GFRA1P56159 465 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 RNFT1Q5M7Z0 435 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 TMEM91Q6ZNR0 172 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 C1orf100Q5SVJ3 147 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 NEU1Q99519 415 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 ABCA1O95477 2261 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 LINC00518Q8N0U6 118 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 G6PC2Q9NQR9 355 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 FANCMQ8IYD8 2048 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF729A6NN14 1252 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms