RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 RBM7Q9Y580 266 aaKnown RBP9.95□□□□□ -0.82
GPC1-204ENST00000426280 A3GALT2U3KPV4 340 aa9.95□□□□□ -0.82
GPC1-204ENST00000426280 FABP12A6NFH5 140 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 RRHO14718 337 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 TUSC2O75896 110 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 IGHG4P01861 327 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 HLA-DRB1P01911 266 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 OR5H8P0DN80 308 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 AADACP22760 399 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 HOXD3P31249 432 aaPredicted RBP9.94□□□□□ -0.82
GPC1-204ENST00000426280 FCGR2CP31995 323 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 RCVRNP35243 200 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 SSBP2P81877 361 aaPredicted RBP9.94□□□□□ -0.82
GPC1-204ENST00000426280 MRGPRG-AS1Q2M3A8 158 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 FAM71F2Q6NXP2 309 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 OR5H2Q8NGV7 314 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 GNB4Q9HAV0 340 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 PARP11Q9NR21 331 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 ZFP57Q9NU63 452 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 SDHAF2Q9NX18 166 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 OR2W1Q9Y3N9 320 aa9.94□□□□□ -0.82
GPC1-204ENST00000426280 SRRM4A7MD48 611 aaKnown RBP9.93□□□□□ -0.82
GPC1-204ENST00000426280 NUDT19A8MXV4 375 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 GABARAPH6UMI1 98 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 H7C2Y5 167 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 M0QYG6 137 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 M0R1X1 148 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 RBBP9O75884 186 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 TPPPO94811 219 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 IGLV2-23P01705 113 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 PSMB8P28062 276 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 S100A5P33763 92 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 HRH1P35367 487 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 LUMP51884 338 aaPredicted RBP9.93□□□□□ -0.82
GPC1-204ENST00000426280 FXYD4P59646 89 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 SLC35B1P78383 322 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 CX3CL1P78423 397 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 FOXE3Q13461 319 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 PSG5Q15238 335 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 CNPY1Q3B7I2 92 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 OVCH2Q7RTZ1 564 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 CCDC190Q86UF4 302 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 COMMD1Q8N668 190 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 FAM103A1Q9BTL3 118 aaKnown RBP9.93□□□□□ -0.82
GPC1-204ENST00000426280 MTFP1Q9UDX5 166 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 WASHC3Q9Y3C0 194 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 V9GYH0 126 aa9.93□□□□□ -0.82
GPC1-204ENST00000426280 ARPC1BO15143 372 aaKnown RBP9.92□□□□□ -0.82
GPC1-204ENST00000426280 PPYP01298 95 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 CRYGBP07316 175 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 ELANEP08246 267 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 MYCNOSP40205 109 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
GPC1-204ENST00000426280 TAS2R46P59540 309 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 PJVKQ0ZLH3 352 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 DYRK1AQ13627 763 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 ZNF79Q15937 498 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 ZNF660Q6AZW8 331 aaPredicted RBP9.92□□□□□ -0.82
GPC1-204ENST00000426280 C15orf40Q8WUR7 153 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 SMIM4Q8WVI0 70 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 SECTM1Q8WVN6 248 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 GPHA2Q96T91 129 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
GPC1-204ENST00000426280 TINAGL1Q9GZM7 467 aaPredicted RBP9.92□□□□□ -0.82
GPC1-204ENST00000426280 CCL28Q9NRJ3 127 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
GPC1-204ENST00000426280 NOTCH3Q9UM47 2321 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 TRAV41A0A0B4J266 112 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 WI2-2373I1.2A0A1W2PRP0 233 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 OR5H14A6NHG9 310 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 LINC00473A8K010 186 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 K7EIL1 84 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 CCL24O00175 119 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 CTDSPLO15194 276 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 IGLV2-14P01704 120 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 CD3DP04234 171 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 VDAC1P21796 283 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 MC5RP33032 325 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 RPS16P62249 146 aaKnown RBP9.91□□□□□ -0.82
GPC1-204ENST00000426280 MRPS10P82664 201 aaKnown RBP9.91□□□□□ -0.82
GPC1-204ENST00000426280 ZNF491Q8N8L2 437 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.91□□□□□ -0.82
GPC1-204ENST00000426280 BVESQ8NE79 360 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 GIMAP1Q8WWP7 306 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 OR5B12Q96R08 314 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 ALX4Q9H161 411 aaPredicted RBP9.91□□□□□ -0.82
GPC1-204ENST00000426280 GHITMQ9H3K2 345 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 METTL1Q9UBP6 276 aaKnown RBP9.91□□□□□ -0.82
GPC1-204ENST00000426280 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
GPC1-204ENST00000426280 CA2P00918 260 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms