RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 KLHDC1Q8N7A1 406 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 AP1S3Q96PC3 154 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 GABRA2P47869 451 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 TMEM242Q9NWH2 141 aa13.59□□□□□ -0.23
PKP4-205ENST00000426248 C3orf85A0A1B0GTC6 90 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 UBE2L5PA0A1B0GUS4 154 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 K7ERU9 68 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 FCN1O00602 326 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 SPRY1O43609 319 aaPredicted RBP13.58□□□□□ -0.23
PKP4-205ENST00000426248 SERF1AO75920 110 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 SERPINE2P07093 398 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 GFRA1P56159 465 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 MEF2BQ02080 365 aaPredicted RBP13.58□□□□□ -0.23
PKP4-205ENST00000426248 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 RNF2Q99496 336 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.23
PKP4-205ENST00000426248 ERRFI1Q9UJM3 462 aaPredicted RBP13.58□□□□□ -0.23
PKP4-205ENST00000426248 CBLN1P23435 193 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 TMEM108Q6UXF1 575 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 ZNF430Q9H8G1 570 aaPredicted RBP13.58□□□□□ -0.24
PKP4-205ENST00000426248 SPRR3Q9UBC9 169 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 FAM27BQ5VT28 67 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 TGIF2LYQ8IUE0 185 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 ZIC4Q8N9L1 334 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 MOB1AQ9H8S9 216 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 ZNF292O60281 2723 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 HSBP1L1C9JCN9 74 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 IL3RAP26951 378 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
PKP4-205ENST00000426248 ANKRD30BLA7E2S9 258 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 PFN1P07737 140 aaKnown RBP13.57□□□□□ -0.24
PKP4-205ENST00000426248 PSG4Q00888 419 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 WDFY1Q8IWB7 410 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 GTF3C1Q12789 2109 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 TCTEX1D1Q8N7M0 179 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 SH2D2AQ9NP31 389 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 TNFSF4P23510 183 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 ARR3P36575 388 aa13.57□□□□□ -0.24
PKP4-205ENST00000426248 FOXG1P55316 489 aaPredicted RBP13.57□□□□□ -0.24
PKP4-205ENST00000426248 ZNF716A6NP11 495 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 PAGE4O60829 102 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 MDH2P40926 338 aaKnown RBP13.56□□□□□ -0.24
PKP4-205ENST00000426248 TMPRSS3P57727 454 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 TBC1D28Q2M2D7 210 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 ANAPC16Q96DE5 110 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 TM4SF5O14894 197 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 THBS3P49746 956 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 FABP6P51161 128 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 OR2H1Q9GZK4 316 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 OBP2BQ9NPH6 170 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 AGFG2O95081 481 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 ADMP35318 185 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 Q6ZWC4 215 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 FAM214BQ7L5A3 538 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 OR56B2PQ8NGI1 322 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 WDYHV1Q96HA8 205 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 C20orf144Q9BQM9 153 aa13.56□□□□□ -0.24
PKP4-205ENST00000426248 CFAP54Q96N23 3096 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 CD300LBA8K4G0 201 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 PROB1E7EW31 1015 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 KBTBD11O94819 623 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 IGHV3-13P01766 116 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 IGHV3-7P01780 117 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 PRR14LQ5THK1 2151 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 LILRA1O75019 489 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 PAFAH1B2P68402 229 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 CNN3Q15417 329 aaKnown RBP13.55□□□□□ -0.24
PKP4-205ENST00000426248 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 OR8G5Q8NG78 346 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 H0Y8G0 127 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 TOX4O94842 621 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 IER3P46695 156 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 SELENOVP59797 346 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 OR1K1Q8NGR3 316 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 GMPPAQ96IJ6 420 aaPredicted RBP13.55□□□□□ -0.24
PKP4-205ENST00000426248 TMEM204Q9BSN7 226 aa13.55□□□□□ -0.24
PKP4-205ENST00000426248 PSG1P11464 419 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 HBG1P69891 147 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 HBG2P69892 147 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 SRPXP78539 464 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 BAXQ07812 192 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 FZR1Q9UM11 496 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 PGPEP1LA6NFU8 196 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 NRASP01111 189 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 ISG15P05161 165 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 RDH5Q92781 318 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms