RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FOXL2NBQ6ZUU3 175 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 OR4A16Q8NH70 328 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 GTF3AQ92664 365 aaKnown RBP11.25□□□□□ -0.61
USP42-203ENST00000426246 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 ODAMA1E959 279 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 MSMO1Q15800 293 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 RND1Q92730 232 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 TMEM56Q96MV1 263 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 TMEM56-RWDD3S4R434 201 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 TSTD3H0UI37 97 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 J3QT63 122 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 TOX4O94842 621 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 IL18BPO95998 194 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
USP42-203ENST00000426246 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 ZNF525Q8N782 197 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 NAV3Q8IVL0 2385 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 SP1P08047 785 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 CDX1P47902 265 aaPredicted RBP11.24□□□□□ -0.61
USP42-203ENST00000426246 ATP5G3P48201 142 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 CATR1Q13166 79 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
USP42-203ENST00000426246 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 PARLQ9H300 379 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 M0R1B8 84 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 REG1BP48304 166 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 UCP3P55916 312 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
USP42-203ENST00000426246 COL10A1Q03692 680 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 TMEM41BQ5BJD5 291 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 HAPLN4Q86UW8 402 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
USP42-203ENST00000426246 WDR86Q86TI4 376 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 OR13A1Q8NGR1 328 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 KLF14Q8TD94 323 aaPredicted RBP11.23□□□□□ -0.61
USP42-203ENST00000426246 MALSU1Q96EH3 234 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 POLDIP2Q9Y2S7 368 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 CA11O75493 328 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
USP42-203ENST00000426246 OPN3Q9H1Y3 402 aaPredicted RBP11.23□□□□□ -0.61
USP42-203ENST00000426246 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 A0A1B0GU03 582 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
USP42-203ENST00000426246 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 TP53TG5Q9Y2B4 290 aa11.23□□□□□ -0.61
USP42-203ENST00000426246 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 OR10A7Q8NGE5 316 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 HOXA5P20719 270 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 UCP2P55851 309 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 H1FOOQ8IZA3 346 aaPredicted RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 LYG1Q8N1E2 194 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 WDR61Q9GZS3 305 aaKnown RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
USP42-203ENST00000426246 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 OR5B21A6NL26 309 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 SLC17A3O00476 420 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 COX5AP20674 150 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 ZNF506Q5JVG8 444 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 IGFL2Q6UWQ7 119 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 MPC1Q9Y5U8 109 aa11.22□□□□□ -0.61
USP42-203ENST00000426246 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 TMEM30CPA0ZSE6 113 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 BTBD17A6NE02 478 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 GYPAP02724 150 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 OR10J4P0C629 311 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 C1QTNF9P0C862 333 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 CDC34P49427 236 aaPredicted RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 FOXF2Q12947 444 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 ACTR3CQ9C0K3 210 aaPredicted RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 SPRR3Q9UBC9 169 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 KLF13Q9Y2Y9 288 aaPredicted RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 TNRC6AQ8NDV7 1962 aaKnown RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 SEC14L6B5MCN3 397 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 NDUFB7P17568 137 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 RPL29P47914 159 aaKnown RBP11.21□□□□□ -0.61
USP42-203ENST00000426246 ERVK-16P61578 105 aa11.21□□□□□ -0.61
USP42-203ENST00000426246 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms