RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 AGBL5Q8NDL9 886 aa10.65□□□□□ -0.7
CTCFL-204ENST00000422869 TMEM45BQ96B21 275 aa10.65□□□□□ -0.7
CTCFL-204ENST00000422869 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-204ENST00000422869 MBNL3Q9NUK0 354 aaKnown RBP10.65□□□□□ -0.7
CTCFL-204ENST00000422869 RNF212BA8MTL3 300 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 S1PR2O95136 353 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 OR2H2O95918 312 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 EPHA8P29322 1005 aaPredicted RBP10.65□□□□□ -0.71
CTCFL-204ENST00000422869 HOXC12P31275 282 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 TIMP3P35625 211 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 EIF4EBP1Q13541 118 aaPredicted RBP10.65□□□□□ -0.71
CTCFL-204ENST00000422869 MSMO1Q15800 293 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 TMEM249Q2WGJ8 235 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 SPINK9Q5DT21 86 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 VN1R17PQ8TDU5 208 aa10.65□□□□□ -0.71
CTCFL-204ENST00000422869 PATZ1Q9HBE1 687 aaKnown RBP10.65□□□□□ -0.71
CTCFL-204ENST00000422869 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 F2Z2F3 143 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 F6UZH7 168 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 MRPL33O75394 65 aaKnown RBP10.64□□□□□ -0.71
CTCFL-204ENST00000422869 TRAPPC6AO75865 159 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 Q5PR19 223 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-204ENST00000422869 TMPRSS7Q7RTY8 843 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 ZNF645Q8N7E2 425 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 RAB1CQ92928 201 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 VAMP8Q9BV40 100 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 RNF114Q9Y508 228 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 YLPM1P49750 1951 aaKnown RBP10.64□□□□□ -0.71
CTCFL-204ENST00000422869 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 HNF1AP20823 631 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTCFL-204ENST00000422869 BATFQ16520 125 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 POM121L2Q96KW2 1035 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 PKIBQ9C010 78 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 ASCL3Q9NQ33 180 aa10.64□□□□□ -0.71
CTCFL-204ENST00000422869 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 P04436 131 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 KITLGP21583 273 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 TMEM204Q9BSN7 226 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 OR2D2Q9H210 308 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 MPC1Q9Y5U8 109 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 CRISP2P16562 243 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 CA6P23280 308 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 THBS3P49746 956 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 RANP62826 216 aaKnown RBP10.63□□□□□ -0.71
CTCFL-204ENST00000422869 OCC1Q8TAD7 63 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 HLA-CQ95604 372 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 MRPL18Q9H0U6 180 aaKnown RBP10.63□□□□□ -0.71
CTCFL-204ENST00000422869 DEPPQ9NTK1 212 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 WIPI2Q9Y4P8 454 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 PI4KAP42356 2102 aa10.63□□□□□ -0.71
CTCFL-204ENST00000422869 SCO2A0A1W2PP80 73 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 C17orf98A8MV24 154 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 CD46P15529 392 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 TFPI2P48307 235 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 GFRA1P56159 465 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 OR5I1Q13606 314 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-204ENST00000422869 OR5AU1Q8NGC0 362 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 LINC00470Q9BZP3 86 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 R4GN57 208 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 KMT2EQ8IZD2 1858 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 IGKV3D-15A0A087WSY6 115 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 J3QT63 122 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 FRMD6-AS1P0C7T7 363 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 EDDM3BP56851 147 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 HLA-DRB5Q30154 266 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 OR10G8Q8NGN5 311 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 CIB3Q96Q77 187 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-204ENST00000422869 PINLYPA6NC86 204 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 K7EN84 100 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 SRFP11831 508 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 PSG7Q13046 419 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 Q8N976 141 aa10.62□□□□□ -0.71
CTCFL-204ENST00000422869 DOCK7Q96N67 2140 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 CD1BP29016 333 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 ZNF90Q03938 601 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 QTRT1Q9BXR0 403 aaKnown RBP10.61□□□□□ -0.71
CTCFL-204ENST00000422869 CHODLQ9H9P2 273 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 SLC17A3O00476 420 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 RRHO14718 337 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 WISP2O76076 250 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 CLDN14O95500 239 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 KRTCAP3Q53RY4 240 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 TUSC5Q8IXB3 177 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 RNF24Q9Y225 148 aa10.61□□□□□ -0.71
CTCFL-204ENST00000422869 PTPRBP23467 1997 aa10.6□□□□□ -0.71
CTCFL-204ENST00000422869 A0A1W2PPV4 95 aa10.6□□□□□ -0.71
CTCFL-204ENST00000422869 GDF1P27539 372 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms