RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
LIMS1-207ENST00000422797 IL18BPO95998 194 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 RNF224P0DH78 156 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 NDUFB7P17568 137 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 KITLGP21583 273 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 FOXG1P55316 489 aaPredicted RBP9.22□□□□□ -0.93
LIMS1-207ENST00000422797 ERVK-16P61578 105 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF816Q0VGE8 651 aaPredicted RBP9.22□□□□□ -0.93
LIMS1-207ENST00000422797 RTP5Q14D33 572 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 INO80CQ6PI98 192 aaPredicted RBP9.22□□□□□ -0.93
LIMS1-207ENST00000422797 WDR86Q86TI4 376 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 OR1L1Q8NH94 360 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 R3HDM4Q96D70 268 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 SFXN3Q9BWM7 321 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 CXXC4Q9H2H0 198 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 CABIN1Q9Y6J0 2220 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 MARCH11A6NNE9 402 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 C9JCJ5 164 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 FNDC10F2Z333 226 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 SCGB1D1O95968 90 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 HPRT1P00492 218 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 CRYABP02511 175 aaKnown RBP9.21□□□□□ -0.93
LIMS1-207ENST00000422797 STAG3L2P0CL84 134 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 STAG3L3P0CL85 134 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 CHRNA7P36544 502 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 MAGEA5P43359 124 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 GNB1P62873 340 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 RPL30P62888 115 aaKnown RBP9.21□□□□□ -0.93
LIMS1-207ENST00000422797 PMP22Q01453 160 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 RAB31Q13636 194 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 SMIM21Q3B7S5 101 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 CST9LP1Q5W188 147 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 OR10G8Q8NGN5 311 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 ZCCHC14Q8WYQ9 949 aaKnown RBP9.21□□□□□ -0.93
LIMS1-207ENST00000422797 CORO2AQ92828 525 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 HLA-CQ95604 372 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 C11orf52Q96A22 123 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 MS4A10Q96PG2 267 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 UHRF2Q96PU4 802 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.93
LIMS1-207ENST00000422797 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 FAM166BA8MTA8 275 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 C17orf98A8MV24 154 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 CDIPTO14735 213 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 MT-ND6P03923 174 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 ZNF883P0CG24 379 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 AREGP15514 252 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 ZNF808Q8N4W9 903 aaPredicted RBP9.21□□□□□ -0.94
LIMS1-207ENST00000422797 PPP1R35Q8TAP8 253 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 CMTM2Q8TAZ6 248 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 FSCN3Q9NQT6 498 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 PPP1R14DQ9NXH3 145 aa9.21□□□□□ -0.94
LIMS1-207ENST00000422797 NCKAP5O14513 1909 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 ITGB1BP1O14713 200 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 HMGB3O15347 200 aaKnown RBP9.2□□□□□ -0.94
LIMS1-207ENST00000422797 NDUFB4O95168 129 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 CELA3AP09093 270 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 TDGF1P13385 188 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 SELLP14151 372 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 NPPCP23582 126 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 CD82P27701 267 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 TNFSF10P50591 281 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 RHOBP62745 196 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 ACP7Q6ZNF0 438 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 TGIF2LXQ8IUE1 241 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 OR4A16Q8NH70 328 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 SGMS2Q8NHU3 365 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 SPRY4Q9C004 299 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 OR2J1Q9GZK6 312 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 IL36BQ9NZH7 164 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 JPT1Q9UK76 154 aa9.2□□□□□ -0.94
LIMS1-207ENST00000422797 PIEZO1Q92508 2521 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 SP1P08047 785 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 CD46P15529 392 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 TIMP3P35625 211 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 GPR12P47775 334 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 GABRA2P47869 451 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 MEOX1P50221 254 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
LIMS1-207ENST00000422797 RTL8BQ17RB0 113 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 TMEM183BQ1AE95 376 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 SPATA46Q5T0L3 261 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 PRAMEF6Q5VXH4 476 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 WDR73Q6P4I2 378 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 TIPARPQ7Z3E1 657 aaKnown RBP9.19□□□□□ -0.94
LIMS1-207ENST00000422797 Q8N7P7 452 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 C1orf162Q8NEQ5 155 aaPredicted RBP9.19□□□□□ -0.94
LIMS1-207ENST00000422797 SLC25A40Q8TBP6 338 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 C5orf30Q96GV9 206 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 QTRT1Q9BXR0 403 aaKnown RBP9.19□□□□□ -0.94
LIMS1-207ENST00000422797 ZDHHC11Q9H8X9 412 aa9.19□□□□□ -0.94
LIMS1-207ENST00000422797 BDP1A6H8Y1 2624 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms