RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 IGLV1-40P01703 118 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 EGR2P11161 476 aaPredicted RBP20.62■□□□□ 0.89
CDK9-202ENST00000421939 PRSS3P35030 304 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 CDK10Q15131 360 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 KPRPQ5T749 579 aaPredicted RBP20.62■□□□□ 0.89
CDK9-202ENST00000421939 MZT2AQ6P582 158 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 TMEM65Q6PI78 240 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 PPP1R27Q86WC6 154 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 MRPL41Q8IXM3 137 aaKnown RBP20.62■□□□□ 0.89
CDK9-202ENST00000421939 TCTEX1D1Q8N7M0 179 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 LINC00482Q8N8I6 264 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 ARPC1AQ92747 370 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 FOXA2Q9Y261 457 aaPredicted RBP20.62■□□□□ 0.89
CDK9-202ENST00000421939 PRELID3BQ9Y3B1 194 aa20.62■□□□□ 0.89
CDK9-202ENST00000421939 SMIM31A0A1B0GVY4 71 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 A0A1W2PN81 502 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 PPYP01298 95 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 CRYGBP07316 175 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 CHRNA7P36544 502 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 MYCNOSP40205 109 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 TMEM267Q0VDI3 215 aaPredicted RBP20.61■□□□□ 0.89
CDK9-202ENST00000421939 OVCH2Q7RTZ1 564 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 OSR1Q8TAX0 266 aaPredicted RBP20.61■□□□□ 0.89
CDK9-202ENST00000421939 SECTM1Q8WVN6 248 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 HSD17B10Q99714 261 aaKnown RBP20.61■□□□□ 0.89
CDK9-202ENST00000421939 FAM103A1Q9BTL3 118 aaKnown RBP20.61■□□□□ 0.89
CDK9-202ENST00000421939 KLK15Q9H2R5 256 aa20.61■□□□□ 0.89
CDK9-202ENST00000421939 MRPS7Q9Y2R9 242 aaKnown RBP20.61■□□□□ 0.89
CDK9-202ENST00000421939 SRRM4A7MD48 611 aaKnown RBP20.6■□□□□ 0.89
CDK9-202ENST00000421939 FCGR3BO75015 233 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 ZNF182P17025 639 aaPredicted RBP20.6■□□□□ 0.89
CDK9-202ENST00000421939 ELK1P19419 428 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 RPL30P62888 115 aaKnown RBP20.6■□□□□ 0.89
CDK9-202ENST00000421939 EIF4EBP1Q13541 118 aaPredicted RBP20.6■□□□□ 0.89
CDK9-202ENST00000421939 GRPEL2Q8TAA5 225 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 RAX2Q96IS3 184 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 P2RX4Q99571 388 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 NUBP2Q9Y5Y2 271 aa20.6■□□□□ 0.89
CDK9-202ENST00000421939 SOX15O60248 233 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 IGLL1P15814 213 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 UBE2KP61086 200 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 FXYD3Q14802 87 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 MSMO1Q15800 293 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 VMA21Q3ZAQ7 101 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 OR2B11Q5JQS5 317 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 C4orf3Q8WVX3 66 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 TCTEX1D2Q8WW35 142 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 RCC1LQ96I51 464 aaKnown RBP20.59■□□□□ 0.89
CDK9-202ENST00000421939 TAS2R8Q9NYW2 309 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 EHFQ9NZC4 300 aa20.59■□□□□ 0.89
CDK9-202ENST00000421939 CCL24O00175 119 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 ARPC1BO15143 372 aaKnown RBP20.58■□□□□ 0.89
CDK9-202ENST00000421939 NAT1P18440 290 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 TAS2R46P59540 309 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 GNB1P62873 340 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 SSBP2P81877 361 aaPredicted RBP20.58■□□□□ 0.89
CDK9-202ENST00000421939 PJVKQ0ZLH3 352 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 DEFB136Q30KP8 78 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 PDLIM3Q53GG5 364 aaPredicted RBP20.58■□□□□ 0.89
CDK9-202ENST00000421939 AKIRIN2Q53H80 203 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 ACTBL2Q562R1 376 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 UNQ5815/PRO19632Q6UWF5 114 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 ZNF66Q6ZN08 573 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 SNX29P2Q8IUI4 249 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 CLVS1Q8IUQ0 354 aaPredicted RBP20.58■□□□□ 0.89
CDK9-202ENST00000421939 GPX8Q8TED1 209 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 GIMAP1Q8WWP7 306 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 DUX3Q96PT4 197 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 CCL28Q9NRJ3 127 aa20.58■□□□□ 0.89
CDK9-202ENST00000421939 CNIH1O95406 144 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 RAB9AP51151 201 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 FXYD4P59646 89 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 TEX45Q8NA69 505 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 LFNGQ8NES3 379 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 OR5H2Q8NGV7 314 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 OR4S2Q8NH73 311 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 RAB2BQ8WUD1 216 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 UBE2E2Q96LR5 201 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 DCUN1D5Q9BTE7 237 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 SLC5A7Q9GZV3 580 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 SCPEP1Q9HB40 452 aa20.57■□□□□ 0.88
CDK9-202ENST00000421939 FAM25AB3EWG3 89 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 FAM25CB3EWG5 89 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 FAM25GB3EWG6 89 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 HERV-K104P61576 105 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 KIAA0141Q14154 515 aaPredicted RBP20.56■□□□□ 0.88
CDK9-202ENST00000421939 SPCS2Q15005 226 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 PYHIN1Q6K0P9 492 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 TMEM17Q86X19 198 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 ZNF491Q8N8L2 437 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 OR5M8Q8NGP6 311 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 GNB4Q9HAV0 340 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 VSIG4Q9Y279 399 aa20.56■□□□□ 0.88
CDK9-202ENST00000421939 DUS4LO95620 317 aaKnown RBP20.55■□□□□ 0.88
CDK9-202ENST00000421939 PMP2P02689 132 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 SAA1P0DJI8 122 aaPredicted RBP20.55■□□□□ 0.88
CDK9-202ENST00000421939 RFX2P48378 723 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 DYRK1AQ13627 763 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 IDO2Q6ZQW0 420 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 MFSD4AQ8N468 514 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms