RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RPL30P62888 115 aaKnown RBP12.46□□□□□ -0.41
BRAT1-202ENST00000421712 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.41
BRAT1-202ENST00000421712 PSG5Q15238 335 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 MSMO1Q15800 293 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 FOXB2Q5VYV0 432 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 ZNF660Q6AZW8 331 aaPredicted RBP12.46□□□□□ -0.41
BRAT1-202ENST00000421712 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 ABHD5Q8WTS1 349 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 SMIM4Q8WVI0 70 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 DDB2Q92466 427 aa12.46□□□□□ -0.41
BRAT1-202ENST00000421712 TINAGL1Q9GZM7 467 aaPredicted RBP12.46□□□□□ -0.41
BRAT1-202ENST00000421712 SPDEFO95238 335 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 RAB3DO95716 219 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 CSF1P09603 554 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 TBPP20226 339 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 S100GP29377 79 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 GNRHRP30968 328 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 SLC35B1P78383 322 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 CATR1Q13166 79 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 VAX1Q5SQQ9 334 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 AADACL3Q5VUY0 350 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 STEAP1BQ6NZ63 245 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 CMTM1Q8IZ96 169 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 SGMS2Q8NHU3 365 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 PARP11Q9NR21 331 aa12.45□□□□□ -0.42
BRAT1-202ENST00000421712 GSTZ1O43708 216 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-202ENST00000421712 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 PGAM2P15259 253 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 VDAC1P21796 283 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 SCGB2B2Q4G0G5 96 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 STPG2Q8N412 459 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 POC5Q8NA72 575 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 OSR1Q8TAX0 266 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-202ENST00000421712 SOSTQ9BQB4 213 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 GON7Q9BXV9 100 aa12.44□□□□□ -0.42
BRAT1-202ENST00000421712 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 IGHV7-81A0A0B4J1V7 117 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 TCRBV4S1A1TA0A5B7 111 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 GPR31O00270 319 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 FCN1O00602 326 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 CNIH1O95406 144 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 GNB1P62873 340 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
BRAT1-202ENST00000421712 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 PHLDA2Q53GA4 152 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 OR4D10Q8NGI6 311 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
BRAT1-202ENST00000421712 FXYD6Q9H0Q3 95 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
BRAT1-202ENST00000421712 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-202ENST00000421712 SRRM4A7MD48 611 aaKnown RBP12.42□□□□□ -0.42
BRAT1-202ENST00000421712 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 M0QZ24 198 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 PGLYRP1O75594 196 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-202ENST00000421712 CA2P00918 260 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 CD74P04233 296 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 RLN1P04808 185 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 CX3CL1P78423 397 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 MEF2DQ14814 521 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 SLC38A6Q8IZM9 456 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 SPAG16Q8N0X2 631 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 Q8N402 240 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-202ENST00000421712 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
BRAT1-202ENST00000421712 A0A1W2PRX2 142 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 PPP5CP53041 499 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 UBE2KP61086 200 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 IDO2Q6ZQW0 420 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 CCDC190Q86UF4 302 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 TEX45Q8NA69 505 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 WIPF2Q8TF74 440 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-202ENST00000421712 V9GYH0 126 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 PLXNB1O43157 2135 aa12.41□□□□□ -0.42
BRAT1-202ENST00000421712 ANKRD20A5PA0PJZ0 165 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 RAMP3O60896 148 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 HRASP01112 189 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 OPN1MWP04001 364 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 IGF1P05019 195 aa12.4□□□□□ -0.42
BRAT1-202ENST00000421712 OPN1MW2P0DN77 364 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms