RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 HCP5Q6MZN7 132 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 OR52M1Q8NGK5 317 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 LY6G6EA0A0G2JKS1 128 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 U3KQA8 63 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 HYPMO75409 117 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 TRGV3P03979 118 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 THY1P04216 161 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF837Q96EG3 531 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-206ENST00000421141 PRSS22Q9GZN4 317 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 NPVFQ9HCQ7 196 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 SLC6A1P30531 599 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 SULT1A1P50225 295 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 C1orf100Q5SVJ3 147 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 DUX5Q96PT3 197 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 MARVELD1Q9BSK0 173 aa9.11□□□□□ -0.95
PTCH1-206ENST00000421141 MAP1LC3B2A6NCE7 125 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 RHBDL1O75783 438 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 CXorf1O96002 111 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 SELENOTP62341 195 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 MAP1LC3BQ9GZQ8 125 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 LPAR5Q9H1C0 372 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 TMEM140Q9NV12 185 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 TRBV5-7A0A0A0MS05 114 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 KBTBD11-OT1A0A1B0GTJ5 212 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 OR2J3O76001 311 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 RD3LP0DJH9 198 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 LYZL2Q7Z4W2 148 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 CADM3Q8N126 398 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
PTCH1-206ENST00000421141 H0YL77 283 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 PSG5Q15238 335 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF672Q499Z4 452 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-206ENST00000421141 COLCA1Q6ZS62 124 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 EAF1Q96JC9 268 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 GOLT1BQ9Y3E0 138 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 KIR2DL2P43627 348 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-206ENST00000421141 TFPI2P48307 235 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 B2MP61769 119 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 MESP1Q9BRJ9 268 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 PLSCR3Q9NRY6 295 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 A0A1W2PP11 408 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 IGHG3P01860 377 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 RAB9AP51151 201 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 WDFY1Q8IWB7 410 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF738Q8NE65 137 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 B4DSR2 109 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 SLC35E3Q7Z769 313 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 OR4P4Q8NGL7 312 aa9.1□□□□□ -0.95
PTCH1-206ENST00000421141 PQLC2LA1A4F0 135 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 MRPL13Q9BYD1 178 aaKnown RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 TMEM56-RWDD3S4R434 201 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 G3V3Q6 166 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 MYPOPQ86VE0 399 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 SIRT4Q9Y6E7 314 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 J3KRW8 73 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 SNCGO76070 127 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 PLA2G5P39877 138 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 ZMAT5Q9UDW3 170 aaKnown RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 ADAM10O14672 748 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 ADAP1O75689 374 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 MOSP00540 346 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 SLC25A33Q9BSK2 321 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 PTPN13Q12923 2485 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 TRAV20A0A0B4J274 112 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 ACAA1P09110 424 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 PGA5P0DJD9 388 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-206ENST00000421141 GSX2Q9BZM3 304 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 OPN4Q9UHM6 478 aa9.09□□□□□ -0.95
PTCH1-206ENST00000421141 IGKV1D-43A0A0B4J1Z2 117 aa9.09□□□□□ -0.96
PTCH1-206ENST00000421141 KLF4O43474 513 aa9.09□□□□□ -0.96
PTCH1-206ENST00000421141 ICMTO60725 284 aa9.09□□□□□ -0.96
PTCH1-206ENST00000421141 ZNF146Q15072 292 aa9.09□□□□□ -0.96
PTCH1-206ENST00000421141 CD1BP29016 333 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 FBXL17Q9UF56 701 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 CRYBA2P53672 197 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 TMEM78Q5T7P6 136 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 FAM216BQ8N7L0 139 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 NHLRC2Q8NBF2 726 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 RAX2Q96IS3 184 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 SLC25A16P16260 332 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 TMEM222Q9H0R3 208 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 ZNF137PP52743 207 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 DDB2Q92466 427 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 NKX6-2Q9C056 277 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-206ENST00000421141 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 MPDU1O75352 247 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 S1PR2O95136 353 aa9.08□□□□□ -0.96
PTCH1-206ENST00000421141 MMP9P14780 707 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms