RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 ZNF785A8K8V0 405 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 BMPR1BO00238 502 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 RBMY1DP0C7P1 496 aaKnown RBP12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 RRASP10301 218 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 RHOGP84095 191 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 CD300EQ496F6 205 aaPredicted RBP12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 TEX45Q8NA69 505 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 OR56B1Q8NGI3 324 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 GFI1Q99684 422 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 AKIP1Q9NQ31 210 aa12.74□□□□□ -0.37
UPF3AP3-201ENST00000420996 FABP7O15540 132 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 CDK1P06493 297 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 CD7P09564 240 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 CD3GP09693 182 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 UBE2KP61086 200 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 ATP5G2Q06055 141 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 SPHARQ15513 63 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 TNXAQ16473 311 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 PRSS8Q16651 343 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 PLAC9Q5JTB6 97 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 DEFB125Q8N687 156 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 OR10J5Q8NHC4 309 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 ZNF230Q9UIE0 474 aaPredicted RBP12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 LSM2Q9Y333 95 aaKnown RBP12.73□□□□□ -0.37
UPF3AP3-201ENST00000420996 TRBV9A0A0B4J1U6 114 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 BET1O15155 118 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 MPPED1O15442 326 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 DIRAS3O95661 229 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 TPBGQ13641 420 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 RAB11BQ15907 218 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 DEFB114Q30KQ6 69 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 IGSF11Q5DX21 431 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 ADTRPQ96IZ2 230 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 CABLES2Q9BTV7 478 aa12.72□□□□□ -0.37
UPF3AP3-201ENST00000420996 TRBV6-7A0A0A0MS04 114 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 OR11H12B2RN74 326 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 TUSC2O75896 110 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 GSTT2P0CG29 244 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 GSTT2BP0CG30 244 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 MRPS15P82914 257 aaKnown RBP12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 ZNF45Q02386 682 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 C2orf76Q3KRA6 126 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 FAM209BQ5JX69 171 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 TMEM91Q6ZNR0 172 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 DYNLRB2Q8TF09 96 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 DDB2Q92466 427 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 TMEM203Q969S6 136 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 FAM3DQ96BQ1 224 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 SRD5A3Q9H8P0 318 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 KCNK7Q9Y2U2 307 aa12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 AK6Q9Y3D8 172 aaKnown RBP12.71□□□□□ -0.37
UPF3AP3-201ENST00000420996 CRYZL1O95825 349 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 PRH1P02810 166 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 FCGR3AP08637 254 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 RANBP1P43487 201 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 CLDN12P56749 244 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 MED22Q15528 200 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 GUCA2BQ16661 112 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 NECAP1Q8NC96 275 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 ACOT12Q8WYK0 555 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 SPIN2AQ99865 258 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 SPIN2BQ9BPZ2 258 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 TECRQ9NZ01 308 aaKnown RBP12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 RBM7Q9Y580 266 aaKnown RBP12.7□□□□□ -0.38
UPF3AP3-201ENST00000420996 PTGES3LE9PB15 166 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 ARL6IP5O75915 188 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 FOLR2P14207 255 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 DUTP33316 252 aaKnown RBP12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 UFD1Q92890 307 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 PLECQ15149 4684 aaKnown RBP12.69□□□□□ -0.38
UPF3AP3-201ENST00000420996 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 LINC00473A8K010 186 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 LGALS9O00182 355 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 EBAG9O00559 213 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 CREBL2O60519 120 aaPredicted RBP12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 ACTL6BO94805 426 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 RAB3CQ96E17 227 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 GINS4Q9BRT9 223 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 ZNF430Q9H8G1 570 aaPredicted RBP12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 DMRT1Q9Y5R6 373 aa12.68□□□□□ -0.38
UPF3AP3-201ENST00000420996 TMEM272A0A1B0GTI8 110 aa12.67□□□□□ -0.38
UPF3AP3-201ENST00000420996 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms