RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 TSNAXQ99598 290 aaKnown RBP6.14□□□□□ -1.43
BDNF-209ENST00000420794 ZNF462Q96JM2 2506 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 IGKV1D-13A0A0B4J2D9 117 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 A0A1B0GU03 582 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 A0A1B0GWJ7 208 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 SMCO3A2RU48 225 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 TOX4O94842 621 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 OR2F2O95006 317 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 NXPH3O95157 252 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 IGKV1-13P0DP09 117 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 REG1BP48304 166 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 OR2F1Q13607 317 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ZNF273Q14593 569 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 DHRS7BQ6IAN0 325 aaPredicted RBP6.13□□□□□ -1.43
BDNF-209ENST00000420794 C11orf87Q6NUJ2 197 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 TNFRSF14Q92956 283 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 F2RL2O00254 374 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 SSSCA1O60232 199 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 SCO1O75880 301 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 SUB1P53999 127 aaKnown RBP eCLIP6.13□□□□□ -1.43
BDNF-209ENST00000420794 ETV3LQ6ZN32 361 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ACOT7LQ6ZUV0 252 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ZDHHC16Q969W1 377 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ST6GAL2Q96JF0 529 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 HARBI1Q96MB7 349 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 C1RLQ9NZP8 487 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 SIAH2O43255 324 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 IGHV2-70P01814 119 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 S100A8P05109 93 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 WNT2P09544 360 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 USF1P22415 310 aaPredicted RBP6.13□□□□□ -1.43
BDNF-209ENST00000420794 S100A11P31949 105 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
BDNF-209ENST00000420794 RAB31Q13636 194 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 TMEM187Q14656 261 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 BATFQ16520 125 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 ANKRD55Q3KP44 614 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 RBMS3Q6XE24 437 aaKnown RBP6.13□□□□□ -1.43
BDNF-209ENST00000420794 RAB40CQ96S21 281 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 GON7Q9BXV9 100 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 MAGT1Q9H0U3 335 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 DPM3Q9P2X0 92 aa6.13□□□□□ -1.43
BDNF-209ENST00000420794 TGOLN2O43493 480 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 MPC2O95563 127 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 TPT1P13693 172 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 BTF3P20290 206 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 UCP1P25874 307 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 SCGB2A2Q13296 93 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 RAB32Q13637 225 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 HERPUD1Q15011 391 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 GPHA2Q96T91 129 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 WASHC3Q9Y3C0 194 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 MGAQ8IWI9 3026 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 NCBP2LA6PVI3 153 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 J3QR06 171 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 M0R1W7 72 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 NDUFS7O75251 213 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 IGHV1-8P0DP01 117 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 G6PCP35575 357 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 OPCMLQ14982 345 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 RPL39P5Q59GN2 51 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 FGFRL1Q8N441 504 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 MSI2Q96DH6 328 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 RHOVQ96L33 236 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 TMEM56Q96MV1 263 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 TP53RKQ96S44 253 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 MALRD1Q5VYJ5 2156 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 DFFBO76075 338 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 CD8AP01732 235 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 FGF2P09038 288 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 RPL12P30050 165 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 ZNF266Q14584 549 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 SPANXN5Q5MJ07 72 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 PRSS54Q6PEW0 395 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 LHFPL5Q8TAF8 219 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 GLYATL2Q8WU03 294 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 SMIM3Q9BZL3 60 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 PLEKHA3Q9HB20 300 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 PSENENQ9NZ42 101 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 PRNDQ9UKY0 176 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 STRAPQ9Y3F4 350 aaKnown RBP6.12□□□□□ -1.43
BDNF-209ENST00000420794 HILPDAQ9Y5L2 63 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 MMP24Q9Y5R2 645 aa6.12□□□□□ -1.43
BDNF-209ENST00000420794 IGKV1-6A0A0C4DH72 117 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 ITGB1BP1O14713 200 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 TAAR5O14804 337 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 SPDEFO95238 335 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 OR8U8P0C7N1 319 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 COL8A1P27658 744 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 LOXP28300 417 aaPredicted RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 GNB1P62873 340 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 HNF4GQ14541 408 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 WDR73Q6P4I2 378 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 DUX4L9Q6RFH8 374 aaPredicted RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 SELENOHQ8IZQ5 122 aaKnown RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 OR4C13Q8NGP0 309 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 UBQLN2Q9UHD9 624 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 RCL1Q9Y2P8 373 aaKnown RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 B4DSR2 109 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 STAG3L2P0CL84 134 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms