RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ABHD14AQ9BUJ0 271 aa9.66□□□□□ -0.86
RFFL-205ENST00000415395 PSENENQ9NZ42 101 aa9.66□□□□□ -0.86
RFFL-205ENST00000415395 C17orf100A8MU93 164 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 HS3ST1O14792 307 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 LHBP01229 141 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 MBP02144 154 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 GRNP28799 593 aaKnown RBP9.65□□□□□ -0.86
RFFL-205ENST00000415395 PAX9P55771 341 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 PAX5Q02548 391 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 TLE1Q04724 770 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 LINC00469Q8N7U9 141 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 RDH5Q92781 318 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 HIVEP3Q5T1R4 2406 aa9.65□□□□□ -0.86
RFFL-205ENST00000415395 TRBV24-1A0A075B6N3 115 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 B9A039 149 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 E7EQL1 145 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 YIF1AO95070 293 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 TMEM50AO95807 157 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 DEFA6Q01524 100 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 CDSNQ15517 529 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 MSMO1Q15800 293 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 LRRC75BQ2VPJ9 315 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 OR2B11Q5JQS5 317 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 ZNF497Q6ZNH5 498 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 MOGAT3Q86VF5 341 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 ZBTB34Q8NCN2 500 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 ITLN2Q8WWU7 325 aaPredicted RBP9.65□□□□□ -0.87
RFFL-205ENST00000415395 AGMATQ9BSE5 352 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 TMEM204Q9BSN7 226 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 MS4A5Q9H3V2 200 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 NAT8Q9UHE5 227 aa9.65□□□□□ -0.87
RFFL-205ENST00000415395 RBM7Q9Y580 266 aaKnown RBP9.65□□□□□ -0.87
RFFL-205ENST00000415395 ANKHD1Q8IWZ3 2542 aaKnown RBP9.64□□□□□ -0.87
RFFL-205ENST00000415395 USP24Q9UPU5 2620 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 IGHV3-64DA0A0J9YX35 117 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 ZFP92A6NM28 416 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 SIRPB1O00241 398 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 WNT9BO14905 357 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 TNFSF12O43508 249 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 IFNA10P01566 189 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 CXCL1P09341 107 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 PSG2P11465 335 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 UQCRFS1P47985 274 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 TMEM267Q0VDI3 215 aaPredicted RBP9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
RFFL-205ENST00000415395 GCSAMQ8N6F7 178 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 ZNF525Q8N782 197 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 OR51H1Q8NH63 302 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 FAM222BQ8WU58 562 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 GCM1Q9NP62 436 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 RNF7Q9UBF6 113 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 URGCP-MRPS24S4R325 110 aa9.64□□□□□ -0.87
RFFL-205ENST00000415395 NBASA2RRP1 2371 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 TANC2Q9HCD6 1990 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 TGIF2-C20orf24A0A0A6YYL0 155 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 DEFB108AA8MXU0 73 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.63□□□□□ -0.87
RFFL-205ENST00000415395 HSPB6O14558 160 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 ERVFRD-1P60508 538 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 ZNF672Q499Z4 452 aaPredicted RBP9.63□□□□□ -0.87
RFFL-205ENST00000415395 FAM90A2PQ658T7 463 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 SLC35E4Q6ICL7 350 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 PPP1R35Q8TAP8 253 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 RCC1LQ96I51 464 aaKnown RBP9.63□□□□□ -0.87
RFFL-205ENST00000415395 OR5B12Q96R08 314 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 RPRMQ9NS64 109 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 OR14J1Q9UGF5 321 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 PITPNC1Q9UKF7 332 aa9.63□□□□□ -0.87
RFFL-205ENST00000415395 DYSFO75923 2080 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 TSTD3H0UI37 97 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 TMEM250H0YL14 139 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 SOX15O60248 233 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 LY86O95711 162 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 IRF2P14316 349 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 LOXP28300 417 aaPredicted RBP9.62□□□□□ -0.87
RFFL-205ENST00000415395 PSMB3P49720 205 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 ZNF343Q6P1L6 599 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 HIST3H2BBQ8N257 126 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
RFFL-205ENST00000415395 WDR61Q9GZS3 305 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms