RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HPNP05981 417 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 IGLL1P15814 213 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 LCN15Q6UWW0 184 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 TCF23Q7RTU1 214 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 ZC2HC1AQ96GY0 325 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 FBLL1A6NHQ2 334 aaKnown RBP17.27■□□□□ 0.36
AP1S3-205ENST00000415298 S1PR2O95136 353 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 PNMTP11086 282 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 PPOXP50336 477 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 DEFB109BQ30KR1 87 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 COX19Q49B96 90 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 CBLN3Q6UW01 205 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 ALOX5APP20292 161 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 THBS3P49746 956 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 RPL32P62910 135 aaKnown RBP17.27■□□□□ 0.36
AP1S3-205ENST00000415298 GABRA6Q16445 453 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 C19orf35Q6ZS72 473 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 FNDC4Q9H6D8 234 aaPredicted RBP17.27■□□□□ 0.36
AP1S3-205ENST00000415298 PLEKHF2Q9H8W4 249 aa17.27■□□□□ 0.36
AP1S3-205ENST00000415298 TMEM189A5PLL7 270 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 F2Z2F3 143 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 NRASP01111 189 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 KRASP01116 189 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 GYPAP02724 150 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 FAM87AP0C7U9 286 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 GPM6AP51674 278 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 RELBQ01201 579 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 IGFBP7Q16270 282 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 LINC00696Q6ZRV3 163 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 LGI3Q8N145 548 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 FAM58AQ8N1B3 248 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 OR2C3Q8N628 320 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 CELA3BP08861 270 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 CCL11P51671 97 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF136P52737 540 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 SPACA3Q8IXA5 215 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 C4orf45Q96LM5 186 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 RAB1BQ9H0U4 201 aa17.26■□□□□ 0.35
AP1S3-205ENST00000415298 ANKRD11Q6UB99 2663 aaPredicted RBP17.26■□□□□ 0.35
AP1S3-205ENST00000415298 SAA2-SAA4A0A096LPE2 208 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 C7orf71A4D174 169 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 MEGF11A6BM72 1044 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 CLDN1O95832 211 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 SSR4P51571 173 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 RUNX1Q01196 453 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 MBD3L1Q8WWY6 194 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF524Q96C55 264 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 PLA2G3Q9NZ20 509 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 SPENQ96T58 3664 aaKnown RBP17.25■□□□□ 0.35
AP1S3-205ENST00000415298 PSMB11A5LHX3 300 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 H0YJW9 148 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 C1orf100Q5SVJ3 147 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 FNDC7Q5VTL7 733 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 SMIM20Q8N5G0 67 aa17.25■□□□□ 0.35
AP1S3-205ENST00000415298 DNAJB12Q9NXW2 375 aaKnown RBP17.25■□□□□ 0.35
AP1S3-205ENST00000415298 TEX48A0A1B0GUV7 120 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 VENTXO95231 258 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 LYPD3O95274 346 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF133P52736 654 aaPredicted RBP17.24■□□□□ 0.35
AP1S3-205ENST00000415298 RPL24P83731 157 aaKnown RBP17.24■□□□□ 0.35
AP1S3-205ENST00000415298 PLAC9Q5JTB6 97 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 SPATA31B1PQ5VZV4 182 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 OR5A1Q8NGJ0 315 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 TMEM171Q8WVE6 324 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 NMNAT3Q96T66 252 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 JKAMPQ9P055 326 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 POLR1DQ9Y2S0 133 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 CHCHD2Q9Y6H1 151 aaPredicted RBP17.24■□□□□ 0.35
AP1S3-205ENST00000415298 A0A1W2PPV4 95 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 TMEM250H0YL14 139 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 LINC00869P0C866 280 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF17P17021 662 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 FSTP19883 344 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 SSTR5P35346 364 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 GAGE5Q13069 117 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 GAGE6Q13070 117 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 LINC01590Q5TEZ4 76 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 MRPL54Q6P161 138 aaKnown RBP17.24■□□□□ 0.35
AP1S3-205ENST00000415298 NINJ1Q92982 152 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 GALMQ96C23 342 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 AP1S3Q96PC3 154 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 ST20Q9HBF5 79 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 BOKQ9UMX3 212 aaPredicted RBP17.24■□□□□ 0.35
AP1S3-205ENST00000415298 RAXQ9Y2V3 346 aa17.24■□□□□ 0.35
AP1S3-205ENST00000415298 FAM24AA6NFZ4 105 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 F2RL2O00254 374 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 MT-ATP6P00846 226 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF728P0DKX0 622 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 CCL3P10147 92 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 IGFBP3P17936 291 aaPredicted RBP17.23■□□□□ 0.35
AP1S3-205ENST00000415298 ATP5J2P56134 94 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 FMODQ06828 376 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF74Q16587 644 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 SPINK14Q6IE38 97 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 TAS2R4Q9NYW5 299 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 DHDHQ9UQ10 334 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 TNFRSF13BO14836 293 aaPredicted RBP17.23■□□□□ 0.35
AP1S3-205ENST00000415298 PTGDSP41222 190 aa17.23■□□□□ 0.35
AP1S3-205ENST00000415298 HIST1H1AQ02539 215 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms