RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 MRPL28Q13084 256 aaKnown RBP3.38□□□□□ -1.87
PTPRK-210ENST00000415055 DGCR6Q14129 220 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 CRMP1Q14194 572 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 TEX30Q5JUR7 227 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 CLVS2Q5SYC1 327 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 LGALS9CQ6DKI2 356 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 LCN12Q6JVE5 192 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 FAM71F2Q6NXP2 309 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 SLC25A26Q70HW3 274 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 TRPM8Q7Z2W7 1104 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 SAMD12Q8N8I0 201 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 OR8J3Q8NGG0 315 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 OR1B1Q8NGR6 318 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 HAVCR2Q8TDQ0 301 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 FLYWCH2Q96CP2 140 aaKnown RBP3.38□□□□□ -1.87
PTPRK-210ENST00000415055 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 TOLLIPQ9H0E2 274 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 PARLQ9H300 379 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 CD300AQ9UGN4 299 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 ZNF107Q9UII5 783 aaPredicted RBP3.38□□□□□ -1.87
PTPRK-210ENST00000415055 V9GYQ6 96 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
PTPRK-210ENST00000415055 TRAV41A0A0B4J266 112 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 IGHV1-3A0A0C4DH29 117 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 IGHV3-38A0A0C4DH36 116 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 TMEM269A0A1B0GVZ9 245 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ODAMA1E959 279 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ZNF729A6NN14 1252 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 RIIAD1A6NNX1 92 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 CXCR6O00574 342 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 DLGAP1O14490 977 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MRASO14807 208 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 DHRS3O75911 302 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 GADD45GO95257 159 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 CYB5AP00167 134 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MOSP00540 346 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 IFNGP01579 166 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 IGLV2-11P01706 119 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 GAPDHP04406 335 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 HSPB1P04792 205 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 FCGR3AP08637 254 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 LGALS1P09382 135 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 HSMCR30P0CW71 290 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ZNF3P17036 446 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 BCL3P20749 454 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ERP29P30040 261 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 BLVRAP53004 296 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 SMIM11AP58511 58 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 TPPP2P59282 170 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 RPS27AP62979 156 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 FGL1Q08830 312 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ZNF876PQ49A33 203 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 SAMD4BQ5PRF9 694 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ADAMTSL4-AS1Q5T5F5 129 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 HACD2Q6Y1H2 254 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 LINC00336Q6ZUF6 198 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 ENTHD1Q8IYW4 607 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 FAM58AQ8N1B3 248 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 DEFB125Q8N687 156 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 C15orf54Q8N8G6 183 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 RFESDQ8TAC1 157 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 GNPDA2Q8TDQ7 276 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 TEAD3Q99594 435 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 TMEM109Q9BVC6 243 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 TTTY10Q9BZA0 68 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 PBOV1Q9GZY1 135 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 WFDC10AQ9H1F0 79 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 OR51V1Q9H2C8 321 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MOB1AQ9H8S9 216 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 PLEKHA1Q9HB21 404 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 EXOSC4Q9NPD3 245 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 RBFOX1Q9NWB1 397 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 GID8Q9NWU2 228 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 SLC2A8Q9NY64 477 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MTCH1Q9NZJ7 389 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 GNG12Q9UBI6 72 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 PSG11Q9UQ72 335 aa3.37□□□□□ -1.87
PTPRK-210ENST00000415055 EXOGQ9Y2C4 368 aaKnown RBP3.37□□□□□ -1.87
PTPRK-210ENST00000415055 MEIKINA0A087WXM9 373 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 IZUMO1RA6ND01 250 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 HELTA6NFD8 242 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 MFSD2BA6NFX1 497 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 OR11H12B2RN74 326 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 ZNF736B4DX44 427 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-210ENST00000415055 FXYD1O00168 92 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
PTPRK-210ENST00000415055 SOX14O95416 240 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 OR2H2O95918 312 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 ANXA3P12429 323 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 NCK1P16333 377 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 UCP1P25874 307 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 ID1P41134 155 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 NPBWR2P48146 333 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 GSSP48637 474 aa3.36□□□□□ -1.87
PTPRK-210ENST00000415055 RIDAP52758 137 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms