RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CARD19Q96LW7 228 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 OR2A7Q96R45 310 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BNQ99877 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 HIST1H2BMQ99879 126 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 NAA38Q9BRA0 125 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SNRNP25Q9BV90 132 aaKnown RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PRSS22Q9GZN4 317 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 EDA2RQ9HAV5 297 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 PDFQ9HBH1 243 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM45AQ9NWC5 275 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 FKBP11Q9NYL4 201 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF226Q9NYT6 803 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SLC2A6Q9UGQ3 507 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 LRRIQ1Q96JM4 1722 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 ABCC3O15438 1527 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 MAPKBP1O60336 1514 aa2.92□□□□□ -1.94
SF3B1-203ENST00000414174 BLMP54132 1417 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-203ENST00000414174 SYNJ1O43426 1573 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 MYH3P11055 1940 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 IQSEC2Q5JU85 1478 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TRAV8-4A0A0B4J246 113 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 A0A0G2JK05 382 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 A0A1B0GWB2 263 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 IGLC7A0M8Q6 106 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 C7orf66A4D0T2 115 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LINC01553A4QN01 128 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LINC01619G3V211 115 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TAX1BP3O14907 124 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CD5LO43866 347 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 ARL6IP5O75915 188 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 NTN1O95631 604 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 KRASP01116 189 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 SLC35G6P0C7Q6 338 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LINC00032P0C843 101 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LAMP1P11279 417 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 FGF3P11487 239 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 IFITM1P13164 125 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CTSEP14091 401 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CRYBB3P26998 211 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 PSMB8P28062 276 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 PFN2P35080 140 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 SAA4P35542 130 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 PPP1CCP36873 323 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 PPICP45877 212 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LIM2P55344 173 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 RBM11P57052 281 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 YPEL3P61236 119 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 RPS24P62847 133 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 HBG1P69891 147 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 HBG2P69892 147 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CRADDP78560 199 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 DAZ2Q13117 558 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 ARFRP1Q13795 201 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CD226Q15762 336 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM30BQ3MIR4 351 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 FAM120AOSQ5T036 256 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CGB2Q6NT52 195 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 MRPL54Q6P161 138 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF730Q6ZMV8 503 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 Q6ZWC4 215 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 DAZ4Q86SG3 579 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TRPT1Q86TN4 253 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 FBXL14Q8N1E6 418 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR4B1Q8NGF8 309 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR5D14Q8NGL3 314 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR4C16Q8NGL9 310 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR2A12Q8NGT7 310 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR2T6Q8NHC8 308 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 OR51E1Q8TCB6 317 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 IL1F10Q8WWZ1 152 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 FGF14Q92915 247 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 FAM19A4Q96LR4 140 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 C2orf48Q96LS8 159 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF300Q96RE9 604 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 IMMP2LQ96T52 175 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM147Q9BVK8 224 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TCEAL2Q9H3H9 227 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 EXOSC3Q9NQT5 275 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 DAZ1Q9NQZ3 744 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 DAZ3Q9NR90 486 aaKnown RBP2.91□□□□□ -1.94
SF3B1-203ENST00000414174 KCNIP2Q9NS61 270 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 CCDC167Q9P0B6 97 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 KCNE5Q9UJ90 142 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 LINC00312Q9Y6C7 94 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 ARAP3Q8WWN8 1544 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TECPR2O15040 1411 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 USP6P35125 1406 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 DCCP43146 1447 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TNS2Q63HR2 1409 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 KIF1AQ12756 1690 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 KIF20BQ96Q89 1820 aa2.91□□□□□ -1.94
SF3B1-203ENST00000414174 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 A0A087X0T9 212 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 IGHV2-26A0A0B4J1V2 119 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TRAV4A0A0B4J268 109 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-203ENST00000414174 TRDV1A0A1B0GX56 115 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
SF3B1-203ENST00000414174 HMSDA8MTL9 139 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms