RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM56-RWDD3S4R434 201 aa14.71□□□□□ -0.05
PHRF1-202ENST00000413872 TMEM116Q8NCL8 245 aa14.71□□□□□ -0.06
PHRF1-202ENST00000413872 LYRM2Q9NU23 88 aaPredicted RBP14.71□□□□□ -0.06
PHRF1-202ENST00000413872 TCF19Q9Y242 345 aa14.71□□□□□ -0.06
PHRF1-202ENST00000413872 HTN1P15515 57 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 TM4SF20Q53R12 229 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 TCAPO15273 167 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 CRISP2P16562 243 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 RELQ04864 619 aaPredicted RBP14.7□□□□□ -0.06
PHRF1-202ENST00000413872 OSR1Q8TAX0 266 aaPredicted RBP14.7□□□□□ -0.06
PHRF1-202ENST00000413872 SRD5A3Q9H8P0 318 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 GUCA2BQ16661 112 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 LDLRAD3Q86YD5 345 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 BCL2P10415 239 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 CRYBA2P53672 197 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 PSG7Q13046 419 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 ASPHD2Q6ICH7 369 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 ZNRF1Q8ND25 227 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 EEF1AKMT3Q96AZ1 226 aa14.7□□□□□ -0.06
PHRF1-202ENST00000413872 MRPL13Q9BYD1 178 aaKnown RBP14.7□□□□□ -0.06
PHRF1-202ENST00000413872 DRAM1Q8N682 238 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 SCN5AQ14524 2016 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 J3KRW8 73 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 RPL7P18124 248 aaKnown RBP14.69□□□□□ -0.06
PHRF1-202ENST00000413872 SULT1A2P50226 295 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 TAF15Q92804 592 aaKnown RBP eCLIP14.69□□□□□ -0.066e-6■■□□□ 12.5
PHRF1-202ENST00000413872 OR4C12Q96R67 309 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 Q1RN00 199 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 IGKV1D-43A0A0B4J1Z2 117 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 S1PR2O95136 353 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 FOSL1P15407 271 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 TCL1AP56279 114 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 DLK1P80370 383 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 FXYD3Q14802 87 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 TMEM97Q5BJF2 176 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 CXorf66Q5JRM2 361 aaPredicted RBP14.69□□□□□ -0.06
PHRF1-202ENST00000413872 SPANXN1Q5VSR9 72 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 CCKARP32238 428 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 ERVS71-1P61550 626 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 FAM216AQ8WUB2 273 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 MS4A10Q96PG2 267 aa14.69□□□□□ -0.06
PHRF1-202ENST00000413872 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
PHRF1-202ENST00000413872 ZNF253O75346 499 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 SSTR5P35346 364 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 LY6EQ16553 131 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 TOMM20LQ6UXN7 152 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 SMIM8Q96KF7 97 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 ADAM11O75078 769 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 PSG9Q00887 426 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 CEP250Q9BV73 2442 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 A8MWL6 223 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 IL18BPO95998 194 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 DCTN5Q9BTE1 182 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 C5orf66Q9H5L9 145 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 OR5AC2Q9NZP5 309 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 CENPVQ7Z7K6 275 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-202ENST00000413872 OR5AU1Q8NGC0 362 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 SLC25A33Q9BSK2 321 aa14.68□□□□□ -0.06
PHRF1-202ENST00000413872 SBF1O95248 1867 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 NPIPB7O75200 414 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 PRSS1P07477 247 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 HERVK_113P61574 105 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 RPS11P62280 158 aaKnown RBP eCLIP14.67□□□□□ -0.06
PHRF1-202ENST00000413872 OR52M1Q8NGK5 317 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 DNAJC4Q9NNZ3 241 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 DEPPQ9NTK1 212 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 A1L4Q6 167 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 ZNF818PQ6ZRF7 136 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 PRNTQ86SH4 94 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 ZNF738Q8NE65 137 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 CBLN4Q9NTU7 201 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 H3BQ15 152 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 HLA-DRB5Q30154 266 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 SLC16A13Q7RTY0 426 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 AQP10Q96PS8 301 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 KCNAB3O43448 404 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 LEAP2Q969E1 77 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 LINC00312Q9Y6C7 94 aa14.67□□□□□ -0.06
PHRF1-202ENST00000413872 PHOX2AO14813 284 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 MGPP08493 103 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 TIMP3P35625 211 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 RPL13AP40429 203 aaKnown RBP14.66□□□□□ -0.06
PHRF1-202ENST00000413872 KIR2DL2P43627 348 aaPredicted RBP14.66□□□□□ -0.06
PHRF1-202ENST00000413872 OR2D3Q8NGH3 330 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 SOSTQ9BQB4 213 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 C12orf77C9JDV5 145 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 RUNX1Q01196 453 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 SYT8Q8NBV8 401 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 KBTBD11-OT1A0A1B0GTJ5 212 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 C7orf77A4D0Y5 90 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 J3QR89 54 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 LAIR2Q6ISS4 152 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 FAM131CQ96AQ9 280 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 TMEM191AQ9H0A3 160 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 ELOA3CA0A087WX78 387 aaPredicted RBP14.66□□□□□ -0.06
PHRF1-202ENST00000413872 MELTFP08582 738 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 LINC00271P0C7V0 271 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 HNRNPA3P51991 378 aaKnown RBP14.66□□□□□ -0.06
PHRF1-202ENST00000413872 TMEM187Q14656 261 aa14.66□□□□□ -0.06
PHRF1-202ENST00000413872 DDB2Q92466 427 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms