RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 MPLP40238 635 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 PPICP45877 212 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF83P51522 516 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 FOXL1Q12952 345 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 PCLAFQ15004 111 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C3AR1Q16581 482 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CELF2-AS1Q8N7Q2 184 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 WDYHV1Q96HA8 205 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ERRFI1Q9UJM3 462 aaPredicted RBP3.97□□□□□ -1.77
PTPN13-202ENST00000411767 HLA-DRB4X5D2U9 266 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZAR1LA6NP61 321 aa3.96□□□□□ -1.77
PTPN13-202ENST00000411767 C9JQL5 133 aa3.96□□□□□ -1.77
PTPN13-202ENST00000411767 PEX10O60683 326 aa3.96□□□□□ -1.77
PTPN13-202ENST00000411767 FAM27D1Q5T7N8 215 aa3.96□□□□□ -1.77
PTPN13-202ENST00000411767 DUX4L9Q6RFH8 374 aaPredicted RBP3.96□□□□□ -1.77
PTPN13-202ENST00000411767 ALKBH3Q96Q83 286 aaPredicted RBP3.96□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PP55 124 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 COX6B1P14854 86 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 PUSL1Q8N0Z8 303 aaKnown RBP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 KIR2DL5BQ8NHK3 375 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 ARHGAP5-AS1Q96IT6 56 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 VKORC1Q9BQB6 163 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 KIF1AQ12756 1690 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 PRR33A8MZF0 331 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 CLPSP04118 112 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 SAXO2Q658L1 398 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 PPDPFLQ8WWR9 84 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 MS4A3Q96HJ5 214 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 WNT10AQ9GZT5 417 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 MROH2AA6NES4 1674 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 PLA2G2AP14555 144 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 RPL27AP46776 148 aaKnown RBP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 CBLL1Q75N03 491 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 LINC01551Q86U37 167 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 RHOVQ96L33 236 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 SARGQ9BW04 601 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 GKN1Q9NS71 199 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 COL5A2P05997 1499 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 TARM1B6A8C7 271 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 EWSR1Q01844 656 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 ERCC8Q13216 396 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 SH2D5Q6ZV89 423 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 CENPVQ7Z7K6 275 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-202ENST00000411767 GCSAMQ8N6F7 178 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 SSMEM1Q8WWF3 244 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 FGF11Q92914 225 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM233B4DJY2 109 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 TIMM23O14925 209 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 BUB3O43684 328 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 THY1P04216 161 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 CD33P20138 364 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 MPV17P39210 176 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 TEX36Q5VZQ5 186 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 MMD2Q8IY49 270 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 RPRMLQ8N4K4 120 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 TEX45Q8NA69 505 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 OR8D4Q8NGM9 314 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 FGFBP2Q9BYJ0 223 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 A4GALTQ9NPC4 353 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 MPC1Q9Y5U8 109 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 ERVK-7P63135 1459 aa3.96□□□□□ -1.78
PTPN13-202ENST00000411767 CAMSAP1Q5T5Y3 1602 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 NDUFC2-KCTD14E9PQ53 114 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 KLK10O43240 276 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 CD69Q07108 199 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 CCL17Q92583 94 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 C10orf35Q96D05 121 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 WBP1LQ9NX94 342 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 DIP2CQ9Y2E4 1556 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV13-1A0A0B4J241 112 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 MPC2O95563 127 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 CCL1P22362 96 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 HERV-K104P63124 156 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SMRP1Q8NCR6 262 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 ITLN2Q8WWU7 325 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 BCL2L10Q9HD36 194 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 PRDM6Q9NQX0 595 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SLC45A1Q9Y2W3 748 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 PRSS21Q9Y6M0 314 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV3A0A0B4J244 114 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 A0A1B0GUT8 65 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 C2CD4BA6NLJ0 364 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 F2Z2F3 143 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 J3QW42 95 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SIGLEC14Q08ET2 396 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 IL17AQ16552 155 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 HSF5Q4G112 596 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 ACTL10Q5JWF8 245 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 PGLYRP3Q96LB9 341 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 RHNO1Q9BSD3 238 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 DSPPQ9NZW4 1301 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 C9orf170A2RU37 121 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TNFRSF9Q07011 255 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 AQP3Q92482 292 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB118Q96PH6 123 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 DUSP15Q9H1R2 295 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms