RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 STX19Q8N4C7 294 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 SLC22A24Q8N4F4 322 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 GDPD1Q8N9F7 314 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 RTN4IP1Q8WWV3 396 aaPredicted RBP3.16□□□□□ -1.9
LSM5-205ENST00000409952 FRZBQ92765 325 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 TSPAN32Q96QS1 320 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 TMEM147Q9BVK8 224 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 OR2D2Q9H210 308 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 LINC00574Q9H8X3 128 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 PDFQ9HBH1 243 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 ZNF586Q9NXT0 402 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 AK3Q9UIJ7 227 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 OR51B4Q9Y5P0 310 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 RFNGQ9Y644 331 aa3.16□□□□□ -1.9
LSM5-205ENST00000409952 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
LSM5-205ENST00000409952 KIF21AQ7Z4S6 1674 aa3.15□□□□□ -1.9
LSM5-205ENST00000409952 CHD2O14647 1828 aaKnown RBP3.15□□□□□ -1.91
LSM5-205ENST00000409952 KIF13AQ9H1H9 1805 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 GPR31O00270 319 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 COX7A2LO14548 114 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 CRYZL1O95825 349 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 CRHP06850 196 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 CGB3P0DN86 165 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 CGB7P0DN87 165 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 ZNF32P17041 273 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 MPV17P39210 176 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 RPS20P60866 119 aaKnown RBP3.15□□□□□ -1.91
LSM5-205ENST00000409952 GNA12Q03113 381 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 C12orf29Q8N999 325 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 IP6K3Q96PC2 410 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 NKX6-2Q9C056 277 aaPredicted RBP3.15□□□□□ -1.91
LSM5-205ENST00000409952 COMMD5Q9GZQ3 224 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 GABARAPL1Q9H0R8 117 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 PARVBQ9HBI1 364 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 RPUSD1Q9UJJ7 312 aaKnown RBP3.15□□□□□ -1.91
LSM5-205ENST00000409952 SLC35A3Q9Y2D2 325 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 PHLDA3Q9Y5J5 127 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 LTBP4Q8N2S1 1624 aa3.15□□□□□ -1.91
LSM5-205ENST00000409952 NUP155O75694 1391 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 TRAPPC13A5PLN9 417 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 TSTD3H0UI37 97 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 LST1O00453 97 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 C1QBP02746 253 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 CISD3P0C7P0 127 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 C12orf74Q32Q52 190 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 AKR1C8PQ5T2L2 129 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 UNQ9165/PRO28630Q6UXU0 137 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 ZNF615Q8N8J6 731 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 OR11G2Q8NGC1 345 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 OR10K1Q8NGX5 313 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 RAB2BQ8WUD1 216 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 OR5P3Q8WZ94 311 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 RBPMSQ93062 196 aaKnown RBP3.14□□□□□ -1.91
LSM5-205ENST00000409952 C12orf43Q96C57 262 aaKnown RBP3.14□□□□□ -1.91
LSM5-205ENST00000409952 ROPN1LQ96C74 230 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 C1QTNF6Q9BXI9 259 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 LRP4O75096 1905 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 THSD7AQ9UPZ6 1657 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 SRCAPQ6ZRS2 3230 aa3.14□□□□□ -1.91
LSM5-205ENST00000409952 RTL1A6NKG5 1358 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 SYNMO15061 1565 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 A8MUN3 132 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 ATP6V0CP27449 155 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 ZNF140P52738 457 aaPredicted RBP3.13□□□□□ -1.91
LSM5-205ENST00000409952 AKR1C2P52895 323 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 TAS2R45P59539 299 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 DEFA1P59665 94 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 RHOBP62745 196 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 APOFQ13790 326 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 GRK1Q15835 563 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 TNFAIP8L3Q5GJ75 292 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 GLT8D1Q68CQ7 371 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 SCXQ7RTU7 201 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 TMEM35BQ8NCS4 154 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 UBALD1Q8TB05 177 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 ZNF721Q8TF20 911 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 NMNAT3Q96T66 252 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 SS18L2Q9UHA2 77 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 PRNDQ9UKY0 176 aa3.13□□□□□ -1.91
LSM5-205ENST00000409952 ZNF318Q5VUA4 2279 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 VPS37CA5D8V6 355 aaPredicted RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 A8MWP4 228 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 PIRO00625 290 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 HMGB3O15347 200 aaKnown RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 MFSD11O43934 449 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 IGKV1D-33P01593 117 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 IGKV1-33P01594 117 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 TRGV3P03979 118 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 HMGN1P05114 100 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 C8GP07360 202 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 TAF6P49848 677 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 ZNF816Q0VGE8 651 aaPredicted RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 CST6Q15828 149 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 IBA57Q5T440 356 aaKnown RBP3.12□□□□□ -1.91
LSM5-205ENST00000409952 GPHB5Q86YW7 130 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms