RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 RNF222A6NCQ9 220 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 UBE2CO00762 179 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ARPC5O15511 151 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 P0C879 139 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PET100P0DJ07 73 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CCL3L1P16619 93 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 GPR12P47775 334 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 FHITP49789 147 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RAB32Q13637 225 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LTC4SQ16873 150 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 AVPI1Q5T686 147 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LINC00311Q8N616 119 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LY6G5BQ8NDX9 201 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 THAP6Q8TBB0 222 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 DDB2Q92466 427 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CITED2Q99967 270 aaPredicted RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 C11orf1Q9H5F2 150 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PUS1Q9Y606 427 aaKnown RBP eCLIP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 A0A1B0GV90 55 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 A0A1W2PPQ1 181 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 LINC00473A8K010 186 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 PITX3O75364 302 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 DEDDO75618 318 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR2F2O95006 317 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 CLDN1O95832 211 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 FOLR2P14207 255 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 PRRX1P54821 245 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR2F1Q13607 317 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 GUCA2BQ16661 112 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 LRRC37A5PQ49AS3 106 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR2B11Q5JQS5 317 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 WDR25Q64LD2 544 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 C1orf229Q6ZS94 237 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 HSD17B13Q7Z5P4 300 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF546Q86UE3 836 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 KCNRGQ8N5I3 272 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR8B3Q8NGG8 313 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 H1FXQ92522 213 aaKnown RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR8B2Q96RD0 313 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR5AC2Q9NZP5 309 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SAA2-SAA4A0A096LPE2 208 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 XKRY2A2RUG3 117 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 A8MXK9 166 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 H0Y8G0 127 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 TEX46H3BTG2 121 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 K7EPK0 472 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 RBFOX2O43251 390 aaKnown RBP eCLIP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 EIF3GO75821 320 aaKnown RBP eCLIP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 IGKV1-5P01602 117 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 MBPP02686 304 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SERPINE2P07093 398 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SAA2P0DJI9 122 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 S100A11P31949 105 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 NUTF2P61970 127 aaKnown RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OPCMLQ14982 345 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 BTNL3Q6UXE8 466 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 FAM71E2Q8N5Q1 922 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 RAB39BQ96DA2 213 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 MFFQ9GZY8 342 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ZFP57Q9NU63 452 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ABCA4P78363 2273 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 A0A0D9SG52 128 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 A0A0G2JRQ6 117 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 A0A1B0GU03 582 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 RAB29O14966 203 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 PPIHO43447 177 aaKnown RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 RAMP3O60896 148 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 NDUFS7O75251 213 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 IGHV1-8P0DP01 117 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SSTR2P30874 369 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 CDKN1BP46527 198 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF137PP52743 207 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 NHLH2Q02577 135 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 HABP2Q14520 560 aaPredicted RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF833PQ6ZTB9 187 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 OR1S1Q8NH92 325 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 LEAP2Q969E1 77 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 AQP10Q96PS8 301 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 GSKIPQ9P0R6 139 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 POMT1Q9Y6A1 747 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 SPTBN1Q01082 2364 aaKnown RBP4.52□□□□□ -1.69
EPHA4-202ENST00000409854 USF3Q68DE3 2245 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 DOPEY1Q5JWR5 2465 aa4.52□□□□□ -1.69
EPHA4-202ENST00000409854 KIAA1324LA8MWY0 1029 aaPredicted RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 DNASE2O00115 360 aaPredicted RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 MED6O75586 246 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 STAG3L3P0CL85 134 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 PAX1P15863 534 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 NFYBP25208 207 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 KIR2DS2P43631 304 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 LPAR6P43657 344 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ID3Q02535 119 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms