RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 IL5P05113 134 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 ANXA3P12429 323 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 LPAR6P43657 344 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 TAGLNQ01995 201 aaKnown RBP10.14□□□□□ -0.79
PMS1-204ENST00000409823 MIDNQ504T8 468 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 SLC35D1Q9NTN3 355 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 PRELID3BQ9Y3B1 194 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 C7orf66A4D0T2 115 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 RNF212BA8MTL3 300 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 MPTX1A8MV57 137 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 SIX6O95475 246 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 IGKV1-39P01597 117 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 IGKV1D-39P04432 117 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 THBS3P49746 956 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 FAM216AQ8WUB2 273 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 MITD1Q8WV92 249 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 PHB2Q99623 299 aa10.14□□□□□ -0.79
PMS1-204ENST00000409823 MS4A7Q9GZW8 240 aaPredicted RBP10.14□□□□□ -0.79
PMS1-204ENST00000409823 FAM25EA8MYX2 175 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 CXCL3P19876 107 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 G6PCP35575 357 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 HES1Q14469 280 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 ZNF695Q8IW36 515 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 C12orf45Q8N5I9 185 aaPredicted RBP10.13□□□□□ -0.79
PMS1-204ENST00000409823 SLC35G3Q8N808 338 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 OR5AN1Q8NGI8 311 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 MALSU1Q96EH3 234 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 TBL2Q9Y4P3 447 aaKnown RBP10.13□□□□□ -0.79
PMS1-204ENST00000409823 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 LIAT1Q6ZQX7 453 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 TNFRSF19Q9NS68 423 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 NUP50Q9UKX7 468 aa10.13□□□□□ -0.79
PMS1-204ENST00000409823 SRRM4A7MD48 611 aaKnown RBP10.12□□□□□ -0.79
PMS1-204ENST00000409823 CDS2O95674 445 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 APOA2P02652 100 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 UCP1P25874 307 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 CNTFRP26992 372 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 FCN2Q15485 313 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 MSMO1Q15800 293 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 C11orf88Q6PI97 169 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 MED28Q9H204 178 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 SNRPGP15A8MWD9 76 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 GOSR2O14653 212 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 RTL8BQ17RB0 113 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 DEFB112Q30KQ8 113 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 CLEC9AQ6UXN8 241 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 SELENOHQ8IZQ5 122 aaKnown RBP10.12□□□□□ -0.79
PMS1-204ENST00000409823 COQ8AQ8NI60 647 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 CFHR4Q92496 578 aa10.12□□□□□ -0.79
PMS1-204ENST00000409823 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
PMS1-204ENST00000409823 A0A0G2JRQ6 117 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 C13orf42A0A1B0GVH6 325 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 SHOXO15266 292 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 SNRNP70P08621 437 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 SRP14P37108 136 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 AKR1C2P52895 323 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 RNASE11Q8TAA1 199 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 FLYWCH2Q96CP2 140 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 ADTRPQ96IZ2 230 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 WASHC3Q9Y3C0 194 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 NXPH3O95157 252 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 RPS16P62249 146 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 LGI3Q8N145 548 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 DMBX1Q8NFW5 382 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 OR11H7Q8NGC8 314 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 OR4S2Q8NH73 311 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 RBPMSQ93062 196 aaKnown RBP10.11□□□□□ -0.79
PMS1-204ENST00000409823 SEC22AQ96IW7 307 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 HARBI1Q96MB7 349 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 CHIAQ9BZP6 476 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 NSG2Q9Y328 171 aa10.11□□□□□ -0.79
PMS1-204ENST00000409823 MARCH11A6NNE9 402 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 VENTXO95231 258 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 IGKV1-5P01602 117 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
PMS1-204ENST00000409823 CCDC144NLQ6NUI1 221 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 TMEM219Q86XT9 240 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 OR8H3Q8N146 312 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 TMEM56Q96MV1 263 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 SSX3Q99909 188 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 TMEM56-RWDD3S4R434 201 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 TXNL1O43396 289 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 FSHBP01225 129 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 F2RL1P55085 397 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 LY6EQ16553 131 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 CHAC2Q8WUX2 184 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 R3HDM4Q96D70 268 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
PMS1-204ENST00000409823 FN1P02751 2386 aaKnown RBP10.1□□□□□ -0.79
PMS1-204ENST00000409823 HPRT1P00492 218 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 FBP1P09467 338 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 H2BFSP57053 126 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 GGNBP1Q5YKI7 109 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms