RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MZB1Q8WU39 189 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 MPC2O95563 127 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 FBXL15Q9H469 300 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ZG16O60844 167 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 CD99P14209 185 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 CIRBPQ14011 172 aaKnown RBP7.23□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM219Q86XT9 240 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 SLC35B3Q9H1N7 401 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 TFF1P04155 84 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 CRYBA2P53672 197 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 AANATQ16613 207 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 OR9G4Q8NGQ1 327 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 OPN4Q9UHM6 478 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 LOC285556D6RIA3 1793 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 A0A0U1RQV5 110 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 RPL36A-HNRNPH2H7BZ11 118 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 IL4P05112 153 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 LSM6P62312 80 aaKnown RBP7.23□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF645Q8N7E2 425 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF646O15015 1829 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-203ENST00000409672 A0A1W2PP11 408 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 PLPP2O43688 288 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 GLIPR1P48060 266 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 FAM89BQ8N5H3 189 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 KLK13Q9UKR3 277 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ASPDHA6ND91 283 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 STPG3Q8N7X2 389 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 SAP25Q8TEE9 199 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ALG14Q96F25 216 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 CLEC7AQ9BXN2 247 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM160Q9NX00 188 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 SYNGR3O43761 229 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 OR5AU1Q8NGC0 362 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 SPSB2Q99619 263 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 RBKSQ9H477 322 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
SCN9A-203ENST00000409672 CRPP02741 224 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 PQLC2Q6ZP29 291 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 RIMKLAQ8IXN7 391 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 PHYHIPLQ96FC7 376 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 DNAL4O96015 105 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 OR2T10Q8NGZ9 312 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 DDA1Q9BW61 102 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 WDR54Q9H977 334 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 KLK8O60259 260 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 NPBWR2P48146 333 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 SMIM4Q8WVI0 70 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 CDX1P47902 265 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-203ENST00000409672 BPIFA4PQ86YQ2 179 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 TCTEX1D1Q8N7M0 179 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 TP53RKQ96S44 253 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 KLHDC2Q9Y2U9 406 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 RUNX1Q01196 453 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF324BQ6AW86 544 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-203ENST00000409672 SPSB4Q96A44 273 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 WNK2Q9Y3S1 2297 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 C5orf67F2Z3F1 127 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 FOXS1O43638 330 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 NPC2P61916 151 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 GOLT1AQ6ZVE7 132 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 ATOH7Q8N100 152 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF680Q8NEM1 530 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 SFRP2Q96HF1 295 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 TCRBV16S1A1N1A0A5B0 115 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 CGB3P0DN86 165 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 RPL39P5Q59GN2 51 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 FAM71F2Q6NXP2 309 aa7.22□□□□□ -1.25
SCN9A-203ENST00000409672 IGHV3-64A0A075B6Q5 118 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 DUXBA0A1W2PPF3 345 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 SIGLEC5O15389 551 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 S1PR2O95136 353 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 SNRPEP62304 92 aaKnown RBP7.21□□□□□ -1.25
SCN9A-203ENST00000409672 EWSR1Q01844 656 aaKnown RBP eCLIP7.21□□□□□ -1.25
SCN9A-203ENST00000409672 MIC13Q5XKP0 118 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 DOCK11Q5JSL3 2073 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 IGHV3-53P01767 116 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 GP1BAP07359 652 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 PTBP1P26599 531 aaKnown RBP eCLIP7.21□□□□□ -1.257e-8■■■□□ 17.7
SCN9A-203ENST00000409672 BSXQ3C1V8 233 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 IGF2P01344 180 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 TSPAN7P41732 249 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 LINC00470Q9BZP3 86 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 CACNA1EQ15878 2313 aa7.21□□□□□ -1.25
SCN9A-203ENST00000409672 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 RBFOX2O43251 390 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN9A-203ENST00000409672 NDUFB4O95168 129 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 SMIM18P0DKX4 95 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CRIM1Q9NZV1 1036 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 C1QCP02747 245 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CRYBB2P43320 205 aa7.21□□□□□ -1.26
SCN9A-203ENST00000409672 RBM11P57052 281 aaKnown RBP7.21□□□□□ -1.26
SCN9A-203ENST00000409672 CEACAM21Q3KPI0 293 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms