RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CPNE2Q96FN4 548 aaPredicted RBP0.59□□□□□ -2.32
PMS1-203ENST00000409593 NMNAT3Q96T66 252 aa0.59□□□□□ -2.32
PMS1-203ENST00000409593 CACNA1BQ00975 2339 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 CHD5Q8TDI0 1954 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 TRAV8-1A0A0A6YYK1 113 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 IGHV1-18A0A0C4DH31 117 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 ORC5O43913 435 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 CFL1P23528 166 aaKnown RBP0.58□□□□□ -2.32
PMS1-203ENST00000409593 FXYD7P58549 80 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 RBM48Q5RL73 367 aaKnown RBP0.58□□□□□ -2.32
PMS1-203ENST00000409593 LCN8Q6JVE9 175 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 ZNF675Q8TD23 568 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 RNASEH2CQ8TDP1 164 aaKnown RBP0.58□□□□□ -2.32
PMS1-203ENST00000409593 IMMP2LQ96T52 175 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 CYTH2Q99418 400 aa0.58□□□□□ -2.32
PMS1-203ENST00000409593 M0R381 172 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 CREBL2O60519 120 aaPredicted RBP0.57□□□□□ -2.32
PMS1-203ENST00000409593 GP1BAP07359 652 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 DEFA4P12838 97 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 SYT1P21579 422 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 USF2Q15853 346 aaPredicted RBP0.57□□□□□ -2.32
PMS1-203ENST00000409593 ARHGAP11BQ3KRB8 267 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 LFNGQ8NES3 379 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 Q8WTZ3 238 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 RNASE6Q93091 150 aaKnown RBP0.57□□□□□ -2.32
PMS1-203ENST00000409593 C12orf43Q96C57 262 aaKnown RBP0.57□□□□□ -2.32
PMS1-203ENST00000409593 EMC3Q9P0I2 261 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 WDR90Q96KV7 1748 aa0.57□□□□□ -2.32
PMS1-203ENST00000409593 A0A087WUU8 490 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 H7C2G1 150 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 PSMB8P28062 276 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 CA5AP35218 305 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 EMP1P54849 157 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 TMEM33P57088 247 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 TPI1P60174 286 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 ELOBQ15370 118 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 MIAQ16674 131 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 Q8N2B8 174 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 ATP6V1C2Q8NEY4 427 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 LRRC45Q96CN5 670 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 NAV1Q8NEY1 1877 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 MED12LQ86YW9 2145 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 TRAPPC13A5PLN9 417 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 SYNGR1O43759 233 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 APOA1P02647 267 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 ALDH3A1P30838 453 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 TBPL1P62380 186 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 FAM173BQ6P4H8 233 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 MS4A6EQ96DS6 147 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 ASCL3Q9NQ33 180 aa0.56□□□□□ -2.32
PMS1-203ENST00000409593 RBM7Q9Y580 266 aaKnown RBP0.56□□□□□ -2.32
PMS1-203ENST00000409593 A0A0D9SEW6 157 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 H3BT86 120 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 SCN2BO60939 215 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 KCNJ3P48549 501 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 H2BFSP57053 126 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 TAS2R20P59543 309 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 CLEC12BQ2HXU8 276 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 FBXO48Q5FWF7 155 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 SIKE1Q9BRV8 207 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 METTL9Q9H1A3 318 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 PARVAQ9NVD7 372 aa0.55□□□□□ -2.32
PMS1-203ENST00000409593 CPAMD8Q8IZJ3 1885 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 MAP3K19Q56UN5 1328 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 TRAV38-1A0A0B4J264 116 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 A0A0J9YW62 118 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 GOLGA8QA0A0J9YX86 632 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 DAPL1A0PJW8 107 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 OR6C6A6NF89 314 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 METTL15A6NJ78 407 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 GOLGA8RI6L899 631 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 NPPAP01160 153 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 EVX1P49640 407 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 SNAP25P60880 206 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 AP1S1P61966 158 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 HPCAP84074 193 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 SMAGPQ0VAQ4 97 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 GNA13Q14344 377 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 SYCP1Q15431 976 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 GID4Q8IVV7 300 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 HDGFL3Q9Y3E1 203 aa0.54□□□□□ -2.32
PMS1-203ENST00000409593 TRAV7A0A075B6U4 112 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 LGALS1P09382 135 aaKnown RBP0.53□□□□□ -2.32
PMS1-203ENST00000409593 F8A1P23610 371 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 GRPRP30550 384 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 RPL28P46779 137 aaKnown RBP0.53□□□□□ -2.32
PMS1-203ENST00000409593 DYNAPQ8N1N2 210 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 STOML3Q8TAV4 291 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 MROQ9BYG7 248 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 SNURFQ9Y675 71 aa0.53□□□□□ -2.32
PMS1-203ENST00000409593 ADAP1O75689 374 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 MT-CO2P00403 227 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 ATP5G1P05496 136 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 HLA-DQB2P05538 268 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 LINC00614P0C842 121 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 REG1BP48304 166 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 ETV1P50549 477 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 RAB14P61106 215 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 DCXRQ7Z4W1 244 aa0.53□□□□□ -2.33
PMS1-203ENST00000409593 TMEM86AQ8N2M4 240 aa0.53□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms