RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 E5RGE8 158 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 NDUFA2O43678 99 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 RPL12P30050 165 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 TEX36Q5VZQ5 186 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 WDR86Q86TI4 376 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 CFHR4Q92496 578 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 ARL11Q969Q4 196 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 MICU1Q9BPX6 476 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 NSG2Q9Y328 171 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 J3QT63 122 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 NPFFO15130 113 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 TUSC2O75896 110 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 TFF1P04155 84 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 TK1P04183 234 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 SELLP14151 372 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 PAX6P26367 422 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 DUSP1P28562 367 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 KCNJ3P48549 501 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 LOXL3P58215 753 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 SP6Q3SY56 376 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 TMEM268Q5VZI3 342 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 REC114Q7Z4M0 266 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 FAM216BQ8N7L0 139 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 GLYATL2Q8WU03 294 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 OR51I2Q9H344 312 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 ZC4H2Q9NQZ6 224 aa10.29□□□□□ -0.76
CHRNA1-205ENST00000409542 DUXBA0A1W2PPF3 345 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 BTBD17A6NE02 478 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 A6NLC8 198 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 MPPED1O15442 326 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 SYNGR1O43759 233 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 JTBO76095 146 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 PRKACAP17612 351 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 LY6EQ16553 131 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 IGSF11Q5DX21 431 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 ZNF880Q6PDB4 577 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 SPERTQ8NA61 448 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 OR5T2Q8NGG2 359 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 ABHD14BQ96IU4 210 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 TAF9BQ9HBM6 251 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 LSM5Q9Y4Y9 91 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
CHRNA1-205ENST00000409542 DNAH9Q9NYC9 4486 aa10.27□□□□□ -0.76
CHRNA1-205ENST00000409542 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 H3BUX3 64 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 GPR31O00270 319 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 CDS2O95674 445 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 GNRHRP30968 328 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 SAA4P35542 130 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 P2RY1P47900 373 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 RPL7L1Q6DKI1 246 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 LYZL2Q7Z4W2 148 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 FAM58AQ8N1B3 248 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 BATF2Q8N1L9 274 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 KLHDC1Q8N7A1 406 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 SUMF2Q8NBJ7 301 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 MRPL30Q8TCC3 161 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 LRRC29Q8WV35 223 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 RTL8AQ9BWD3 113 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 TMEM222Q9H0R3 208 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 ARV1Q9H2C2 271 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 IL36RNQ9UBH0 155 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 FBXL17Q9UF56 701 aa10.27□□□□□ -0.77
CHRNA1-205ENST00000409542 LOC105371267A0A1B0GV96 52 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 TMEM218A2RU14 115 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 SULT1A2P50226 295 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 PJVKQ0ZLH3 352 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 NSUN5P1Q3KNT7 163 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 HCP5Q6MZN7 132 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 FOXRED2Q8IWF2 684 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 Q8IYB0 196 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 UBAC2Q8NBM4 344 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 OR4A4PQ8NGN8 299 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 LHFPL5Q8TAF8 219 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 TP53RKQ96S44 253 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 SPIN2AQ99865 258 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 SPIN2BQ9BPZ2 258 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 DCTN5Q9BTE1 182 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 CABLES2Q9BTV7 478 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 OR2S2Q9NQN1 319 aa10.26□□□□□ -0.77
CHRNA1-205ENST00000409542 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
CHRNA1-205ENST00000409542 PIGBOS1A0A0B4J2F0 54 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms