RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IGHV3-7P01780 117 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 WNT2P09544 360 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 ZNF816Q0VGE8 651 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 EIF4EBP1Q13541 118 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 DUX4L9Q6RFH8 374 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 ATG101Q9BSB4 218 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 MMP24Q9Y5R2 645 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 ARL16Q0P5N6 197 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 ZNF645Q8N7E2 425 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 OR2G3Q8NGZ4 309 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 FAM57AQ8TBR7 257 aa12.66□□□□□ -0.38
SCAMP4-202ENST00000409472 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 DOCK11Q5JSL3 2073 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 C17orf98A8MV24 154 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 SRRM5B3KS81 715 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 TGOLN2O43493 480 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 PRDX2P32119 198 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 TIMP3P35625 211 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 CCL20P78556 96 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 PRR30Q53SZ7 412 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 HAPLN4Q86UW8 402 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 TGIF2LYQ8IUE0 185 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 FAM169BQ8N8A8 192 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 Q8NA96 180 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 ZNRF1Q8ND25 227 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 A0A087WWC5 75 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 M0R143 59 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 DLEU1O43261 78 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 S1PR2O95136 353 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 CRYAAP02489 173 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 G6PCP35575 357 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 PLA2G5P39877 138 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 CD200P41217 278 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 FOXC1Q12948 553 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 SMDT1Q9H4I9 107 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 IGF2RP11717 2491 aa12.65□□□□□ -0.38
SCAMP4-202ENST00000409472 LINC00473A8K010 186 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 METTL15P1P0C7V9 234 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 TUBG1P23258 451 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 ZNF266Q14584 549 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 FAM180AQ6UWF9 173 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 LSM10Q969L4 123 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 TUBG2Q9NRH3 451 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 KRASP01116 189 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 SOHLH1Q5JUK2 328 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 ZNF664Q8N3J9 261 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 RNASEH2CQ8TDP1 164 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 PSG11Q9UQ72 335 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 PUS1Q9Y606 427 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 PTPRQQ9UMZ3 2332 aa12.64□□□□□ -0.39
SCAMP4-202ENST00000409472 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 IFNL4K9M1U5 179 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 SYNGR2O43760 224 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 SLC25A6P12236 298 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 BPIFB3P59826 476 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 ELOBQ15370 118 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 LFNGQ8NES3 379 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 Q9UFV3 132 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 A8MXE2 369 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 MMP9P14780 707 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 GLRXP35754 106 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 BAXQ07812 192 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 DOLPP1Q86YN1 238 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 Q8WTZ3 238 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 NINJ1Q92982 152 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 ATP5SQ99766 215 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 AGMATQ9BSE5 352 aa12.63□□□□□ -0.39
SCAMP4-202ENST00000409472 PROP1O75360 226 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 GNG10P50151 68 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 SAPCD1Q5SSQ6 148 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 RARRES2Q99969 163 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 RSG1Q9BU20 258 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 DSCAML1Q8TD84 2053 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 IGLV3-9A0A075B6K5 115 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 ODAMA1E959 279 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 CYB5BO43169 146 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 TRGC2P03986 189 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 P0C879 139 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 GZMBP10144 247 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 PITPNC1Q9UKF7 332 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms