RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 MEF2CQ06413 473 aaPredicted RBP11□□□□□ -0.65
LIMS1-204ENST00000409441 BAXQ07812 192 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 PRR18Q8N4B5 295 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 ZNF645Q8N7E2 425 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 LY6G5BQ8NDX9 201 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 OR51H1Q8NH63 302 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 GPHA2Q96T91 129 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 KCNS2Q9ULS6 477 aa11□□□□□ -0.65
LIMS1-204ENST00000409441 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 hADV38S2A0JD32 116 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 MEX3AA1L020 520 aaKnown RBP10.99□□□□□ -0.65
LIMS1-204ENST00000409441 WRBO00258 174 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 HBZP02008 142 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 SPP1P10451 314 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 ZNF266Q14584 549 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 PXDC1Q5TGL8 231 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 DRAM1Q8N682 238 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 TCTEX1D1Q8N7M0 179 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 OR8U1Q8NH10 309 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 OR1L1Q8NH94 360 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 C8orf46Q8TAG6 207 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 BSCL2Q96G97 398 aaPredicted RBP10.99□□□□□ -0.65
LIMS1-204ENST00000409441 NCOR1P1Q9H4R4 102 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 FLNAP21333 2647 aaKnown RBP10.99□□□□□ -0.65
LIMS1-204ENST00000409441 AKAP9Q99996 3911 aa10.99□□□□□ -0.65
LIMS1-204ENST00000409441 TRAV20A0A0B4J274 112 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 IGHV2-70DA0A0C4DH43 119 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 ENSAO43768 121 aaKnown RBP10.98□□□□□ -0.65
LIMS1-204ENST00000409441 SSSCA1O60232 199 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 FBXO24O75426 580 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 LIPFP07098 398 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 CD99P14209 185 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 F2RL1P55085 397 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 NHLH2Q02577 135 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 CXorf66Q5JRM2 361 aaPredicted RBP10.98□□□□□ -0.65
LIMS1-204ENST00000409441 BTNL8Q6UX41 500 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 SPAG16Q8N0X2 631 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 RNASE11Q8TAA1 199 aaKnown RBP10.98□□□□□ -0.65
LIMS1-204ENST00000409441 CORO2AQ92828 525 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 TMEM186Q96B77 213 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 TMUB1Q9BVT8 246 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 HIF1ANQ9NWT6 349 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 OR6C3Q9NZP0 311 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 STRAPQ9Y3F4 350 aaKnown RBP10.98□□□□□ -0.65
LIMS1-204ENST00000409441 DOCK11Q5JSL3 2073 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 TRGV10A0A0A0MS01 117 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 IGSF23A1L1A6 192 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 FAM24AA6NFZ4 105 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 LPAR6P43657 344 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 CAV2P51636 162 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 HTD2P86397 168 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 ZNF273Q14593 569 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 BTNL3Q6UXE8 466 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 TMEM252Q8N6L7 170 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 OR13A1Q8NGR1 328 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 INSIG2Q9Y5U4 225 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 LINC00312Q9Y6C7 94 aa10.98□□□□□ -0.65
LIMS1-204ENST00000409441 ARHGAP32A7KAX9 2087 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 CR1P17927 2039 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 ATG12O94817 140 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 IGKV1-39P01597 117 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 APOC3P02656 99 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 IGKV1D-39P04432 117 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 FOSL1P15407 271 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 GZMHP20718 246 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 DVL1P1P54792 670 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-204ENST00000409441 ARF6P62330 175 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 RPL23AP62750 156 aaKnown RBP10.97□□□□□ -0.65
LIMS1-204ENST00000409441 CATR1Q13166 79 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 CR1LQ2VPA4 569 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 ZNF585BQ52M93 769 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 KIAA2026Q5HYC2 2103 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 TCF23Q7RTU1 214 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 MRGPRDQ8TDS7 321 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 NARS2Q96I59 477 aaKnown RBP10.97□□□□□ -0.65
LIMS1-204ENST00000409441 PARP12Q9H0J9 701 aaKnown RBP10.97□□□□□ -0.65
LIMS1-204ENST00000409441 TMA7Q9Y2S6 64 aaKnown RBP10.97□□□□□ -0.65
LIMS1-204ENST00000409441 ACANP16112 2415 aa10.97□□□□□ -0.65
LIMS1-204ENST00000409441 YLPM1P49750 1951 aaKnown RBP10.96□□□□□ -0.65
LIMS1-204ENST00000409441 A0A0G2JRQ6 117 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 A0A1W2PPH5 198 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 FAM90A26D6RGX4 464 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 SPINT2O43291 252 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 CHST1O43916 411 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 CGB3P0DN86 165 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 CGB7P0DN87 165 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 CCL3L1P16619 93 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 PAX8Q06710 450 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
LIMS1-204ENST00000409441 C10orf91Q5T1B1 145 aa10.96□□□□□ -0.65
LIMS1-204ENST00000409441 CLEC9AQ6UXN8 241 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms