RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ECI1P42126 302 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 ARHGDIBP52566 201 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 ZDHHC22Q8N966 263 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 CHST1O43916 411 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 OR5AC1P0C628 307 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 VSIG10L2P0DP72 767 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 TMEM11P17152 192 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 F2RL1P55085 397 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 CATR1Q13166 79 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 SURF2Q15527 256 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 VKORC1L1Q8N0U8 176 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 FAM90A9PA6NNJ1 464 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 S1PR2O95136 353 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 VAMP1P23763 118 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 F2RP25116 425 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 CD1BP29016 333 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 S100GP29377 79 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 RPS16P62249 146 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 RTL8BQ17RB0 113 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 OR52B4Q8NGK2 314 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 SCGB3A2Q96PL1 93 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 PRELID3BQ9Y3B1 194 aa11.28□□□□□ -0.6
CHRNA1-204ENST00000409323 BTBD17A6NE02 478 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 SRRM4A7MD48 611 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 PLXNB1O43157 2135 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 MOSP00540 346 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 LPAR6P43657 344 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 RND3P61587 244 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 SUPT4H1P63272 117 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 PPP1R1AQ13522 171 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 MSMO1Q15800 293 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 ZNF585BQ52M93 769 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 OR2T10Q8NGZ9 312 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
CHRNA1-204ENST00000409323 A6NDX4 124 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 SHOXO15266 292 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 MC5RP33032 325 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 DYNLT3P51808 116 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 UBE2MP61081 183 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 MMDQ15546 238 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 LIN54Q6MZP7 749 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 PDPNQ86YL7 162 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 SEC22CQ9BRL7 303 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
CHRNA1-204ENST00000409323 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 HILS1P60008 231 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 RRAS2P62070 204 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 C4orf46Q504U0 113 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 SLC25A42Q86VD7 318 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 LHFPL5Q8TAF8 219 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 ST6GAL2Q96JF0 529 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
CHRNA1-204ENST00000409323 H0Y980 276 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 SLC25A17O43808 307 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 HLA-AP01891 365 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 OR4E1P0C645 316 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 G6PCP35575 357 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 CD300CQ08708 224 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 CBX3Q13185 183 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 EBI3Q14213 229 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
CHRNA1-204ENST00000409323 TMEM128Q5BJH2 165 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms