RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NHLRC4P0CG21 123 aaPredicted RBP7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 ARPC4P59998 168 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 UBE2KP61086 200 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 GNB1P62873 340 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 PLA2G7Q13093 441 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 FAM209BQ5JX69 171 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 VAX1Q5SQQ9 334 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 ZNF645Q8N7E2 425 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 BVESQ8NE79 360 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 LGALS14Q8TCE9 139 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 MAFIPQ8WZ33 124 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 BORCS5Q969J3 196 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 OR5B12Q96R08 314 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 PHB2Q99623 299 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 AIFM2Q9BRQ8 373 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 FAM103A1Q9BTL3 118 aaKnown RBP7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 ST6GALNAC5Q9BVH7 336 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 RANGRFQ9HD47 186 aaPredicted RBP7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 DIABLOQ9NR28 239 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 FBXO7Q9Y3I1 522 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 OR2W1Q9Y3N9 320 aa7.05□□□□□ -1.28
SNORD88A-201ENST00000408314 SMIM30A4D0T7 59 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 TMEM235A6NFC5 223 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 FCN1O00602 326 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 MPPED1O15442 326 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SOX15O60248 233 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SAP30O75446 220 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 LY86O95711 162 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 CRYZL1O95825 349 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 DUTP33316 252 aaKnown RBP7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SDC2P34741 201 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 KIR2DS2P43631 304 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 CBX5P45973 191 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 MXD1Q05195 221 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 KIAA0141Q14154 515 aaPredicted RBP7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 MSMO1Q15800 293 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 NEDD8Q15843 81 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 KCTD9Q7L273 389 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SLC25A42Q86VD7 318 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 NR2C2APQ86WQ0 139 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 OR4S2Q8NH73 311 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 NUDCD2Q8WVJ2 157 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 USMG5Q96IX5 58 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 OR4C12Q96R67 309 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SPIN2AQ99865 258 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 SPIN2BQ9BPZ2 258 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 ANXA10Q9UJ72 324 aa7.04□□□□□ -1.28
SNORD88A-201ENST00000408314 A0A087WXM4 84 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TNFAIP8O95379 198 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 HLA-DQB1P01920 261 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 EGR2P11161 476 aaPredicted RBP7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 SNRPBP14678 240 aaKnown RBP7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 CDK10Q15131 360 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TNXAQ16473 311 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TATDN3Q17R31 274 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 IDNKQ5T6J7 187 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 ZNF66Q6ZN08 573 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 OVCH2Q7RTZ1 564 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 ZBTB34Q8NCN2 500 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 BEST4Q8NFU0 473 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 DDB2Q92466 427 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 DCUN1D4Q92564 292 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 RBMXL1Q96E39 390 aaKnown RBP7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 RHOVQ96L33 236 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 DCUN1D5Q9BTE7 237 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TINAGL1Q9GZM7 467 aaPredicted RBP7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TPSG1Q9NRR2 321 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 RBMX2Q9Y388 322 aaKnown RBP7.03□□□□□ -1.28
SNORD88A-201ENST00000408314 TRAV18A0A075B6X5 111 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 IGHV4OR15-8A0A075B7B6 117 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 A0A087WW49 117 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 FCGR3BO75015 233 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 TUSC2O75896 110 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 HRASP01112 189 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 IGHV3-11P01762 117 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 CRYGBP07316 175 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 OR9G9P0C7N8 305 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 NFYAP23511 347 aaPredicted RBP7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 MAS1LP35410 378 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 SLURP1P55000 103 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 CATR1Q13166 79 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 PRSS8Q16651 343 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 ACSM6Q6P461 480 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 TCTEX1D2Q8WW35 142 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 SRSF12Q8WXF0 261 aaKnown RBP7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 ACOT12Q8WYK0 555 aa7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 S100A16Q96FQ6 103 aaKnown RBP7.02□□□□□ -1.29
SNORD88A-201ENST00000408314 PRR25Q96S07 402 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms