RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 RBBP9O75884 186 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 IGHV3-11P01762 117 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 IFNA6P05013 189 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 LGALS1P09382 135 aaKnown RBP16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 DTYMKP23919 212 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 CD40LGP29965 261 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 ARL6IP1Q15041 203 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 IDNKQ5T6J7 187 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 HACD4Q5VWC8 232 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 SLC25A38Q96DW6 304 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 GINS4Q9BRT9 223 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 ST6GALNAC5Q9BVH7 336 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 SDHAF2Q9NX18 166 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 GAB2Q9UQC2 676 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 SACSQ9NZJ4 4579 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 STAB2Q8WWQ8 2551 aa16.23■□□□□ 0.19
RHBDD3-202ENST00000406335 DIRAS3O95661 229 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 HSPB1P04792 205 aaKnown RBP16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 RPS16P62249 146 aaKnown RBP16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 CX3CL1P78423 397 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 TMEM267Q0VDI3 215 aaPredicted RBP16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 HAPLN4Q86UW8 402 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 H1FOOQ8IZA3 346 aaPredicted RBP16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 MINDY2Q8NBR6 621 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 CLCC1Q96S66 551 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 SPATA25Q9BR10 227 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 EDA2RQ9HAV5 297 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 SLC35D1Q9NTN3 355 aa16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 FOXA2Q9Y261 457 aaPredicted RBP16.22■□□□□ 0.19
RHBDD3-202ENST00000406335 SORL1Q92673 2214 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 SSX5O60225 188 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 APOA2P02652 100 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 EGR2P11161 476 aaPredicted RBP16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 PSG5Q15238 335 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 PDPNQ86YL7 162 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 TSPAN14Q8NG11 270 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 YIPF6Q96EC8 236 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 MS4A10Q96PG2 267 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 RNF5Q99942 180 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 TPSG1Q9NRR2 321 aa16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 METTL1Q9UBP6 276 aaKnown RBP16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 RBM7Q9Y580 266 aaKnown RBP16.21■□□□□ 0.19
RHBDD3-202ENST00000406335 A0A087WXM4 84 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 J3QRK9 145 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 TNFAIP8O95379 198 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 C19orf54Q5BKX5 351 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 ZNF660Q6AZW8 331 aaPredicted RBP16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 TUBA4BQ9H853 241 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 DNAH7Q8WXX0 4024 aa16.2■□□□□ 0.18
RHBDD3-202ENST00000406335 SCGNO76038 276 aa16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 CRIP2P52943 208 aaPredicted RBP16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 GNG2P59768 71 aa16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 LSM3P62310 102 aaKnown RBP16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 TSNAXQ99598 290 aaKnown RBP16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 FAM103A1Q9BTL3 118 aaKnown RBP16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 NUBP2Q9Y5Y2 271 aa16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 ETV7Q9Y603 341 aa16.19■□□□□ 0.18
RHBDD3-202ENST00000406335 TRAV18A0A075B6X5 111 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 SLC25A17O43808 307 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 AIREO43918 545 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 SOX15O60248 233 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 CA2P00918 260 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 SCAND1P57086 179 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 TPPP2P59282 170 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 PYHIN1Q6K0P9 492 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 UNQ5815/PRO19632Q6UWF5 114 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 TCTEX1D1Q8N7M0 179 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 BVESQ8NE79 360 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 DCSTAMPQ9H295 470 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 ZNF355PQ9NSJ1 428 aa16.18■□□□□ 0.18
RHBDD3-202ENST00000406335 ARPC1BO15143 372 aaKnown RBP16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 SPDEFO95238 335 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 IGLV2-23P01705 113 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 NFYAP23511 347 aaPredicted RBP16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 TIMM50Q3ZCQ8 353 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 ACTBL2Q562R1 376 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 Q8N1Y9 231 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 C19orf73Q9NVV2 129 aa16.17■□□□□ 0.18
RHBDD3-202ENST00000406335 LINC00473A8K010 186 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 PTHLHP12272 177 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 CNIH2Q6PI25 160 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 ZNF562Q6V9R5 426 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 PPP1R27Q86WC6 154 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 IL17DQ8TAD2 202 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 VCX3AQ9NNX9 186 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 SPATA2Q9UM82 520 aa16.16■□□□□ 0.18
RHBDD3-202ENST00000406335 IGKV1D-13A0A0B4J2D9 117 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 SRRM4A7MD48 611 aaKnown RBP16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 A8MZ25 164 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 IGKV1-13P0DP09 117 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 DUTP33316 252 aaKnown RBP16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 SSBP2P81877 361 aaPredicted RBP16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 PJVKQ0ZLH3 352 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 HAGHQ16775 308 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 GTSCR1Q86UQ5 136 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 GVQW1Q8N7I0 195 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 LFNGQ8NES3 379 aa16.15■□□□□ 0.18
RHBDD3-202ENST00000406335 DDB2Q92466 427 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms