RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF596Q8TC21 504 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CD300LFQ8TDQ1 290 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 FAM216AQ8WUB2 273 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 RPEQ96AT9 228 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 TMEM186Q96B77 213 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 GPR146Q96CH1 333 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 HEXA-AS1Q9H8Q6 139 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 PLSCR3Q9NRY6 295 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 BEX4Q9NWD9 120 aaPredicted RBP3.02□□□□□ -1.93
RTN4-208ENST00000404909 MBD2Q9UBB5 411 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 CACNG5Q9UF02 275 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 NSG2Q9Y328 171 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 HILPDAQ9Y5L2 63 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 MTORP42345 2549 aa3.02□□□□□ -1.93
RTN4-208ENST00000404909 BUB1B-PAK6H3BSN5 160 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PAX1P15863 534 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SLC25A16P16260 332 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 DVL1P1P54792 670 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 LGALS4P56470 323 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ERVK-16P61578 105 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 RTL8BQ17RB0 113 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 NMSQ5H8A3 153 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 CXorf66Q5JRM2 361 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 C11orf87Q6NUJ2 197 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 Q6ZRM9 215 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ZNF833PQ6ZTB9 187 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 H2BFWTQ7Z2G1 175 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 LHFPL4Q7Z7J7 247 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 MOB3BQ86TA1 216 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ZNF546Q86UE3 836 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 LINC00311Q8N616 119 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 OR4P4Q8NGL7 312 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 OR4S2Q8NH73 311 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ASB13Q8WXK3 278 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 DCUN1D4Q92564 292 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 LHX4Q969G2 390 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 IL22RA2Q969J5 263 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 R3HDM4Q96D70 268 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SPIN2AQ99865 258 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SPIN2BQ9BPZ2 258 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SLC35D1Q9NTN3 355 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 INSIG2Q9Y5U4 225 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 KPTNQ9Y664 436 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PLXNB1O43157 2135 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 IGHV3OR16-10A0A075B7F0 116 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 A8MXK9 166 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 RNASEK-C17orf49H0YIS7 233 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 WRBO00258 174 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SHOXO15266 292 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ATG12O94817 140 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 HPRT1P00492 218 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 IGLV1-47P01700 117 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 APOA2P02652 100 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 MBPP02686 304 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 RLN2P04090 185 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 HTR1DP28221 377 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 NKX2-1P43699 371 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 PAX2Q02962 417 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SMCO1Q147U7 214 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SSX2Q16385 188 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 LURAP1LQ8IV03 231 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 IQCF2Q8IXL9 164 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 TCTEX1D1Q8N7M0 179 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 C8orf31Q8N9H6 132 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ADTRPQ96IZ2 230 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 Q96MF0 132 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ZC4H2Q9NQZ6 224 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 HIF1ANQ9NWT6 349 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 OR5AC2Q9NZP5 309 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 GAB2Q9UQC2 676 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PIGBOS1A0A0B4J2F0 54 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 DUXBA0A1W2PPF3 345 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 H0YIZ8 118 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ST8SIA3O43173 380 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SSSCA1O60232 199 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 MSMBP08118 114 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PET100P0DJ07 73 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 NQO2P16083 231 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 HOXB4P17483 251 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 KIR2DS2P43631 304 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 OR2B8PP59922 312 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 RPS16P62249 146 aaKnown RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 POLR2GP62487 172 aaKnown RBP eCLIP3.01□□□□□ -1.93
RTN4-208ENST00000404909 SRSF4Q08170 494 aaKnown RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 SPINK9Q5DT21 86 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 C1orf122Q6ZSJ8 110 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 C9orf62Q8N4C0 152 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 INO80EQ8NBZ0 244 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 BEND2Q8NDZ0 799 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 DDB2Q92466 427 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 TNFRSF14Q92956 283 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 ST6GALNAC6Q969X2 333 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 RHOVQ96L33 236 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 MFFQ9GZY8 342 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 SIRPDQ9H106 197 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PLEKHA2Q9HB19 425 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 AMMECR1Q9Y4X0 333 aaPredicted RBP3.01□□□□□ -1.93
RTN4-208ENST00000404909 NAV3Q8IVL0 2385 aa3.01□□□□□ -1.93
RTN4-208ENST00000404909 PDZD2O15018 2839 aa3□□□□□ -1.93
RTN4-208ENST00000404909 IGHV1-3A0A0C4DH29 117 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms