RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FCGR3BO75015 233 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 PI3P19957 117 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 CNTFRP26992 372 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 MMDQ15546 238 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 TMEM177Q53S58 311 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 C11orf88Q6PI97 169 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 OR51H1Q8NH63 302 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 RANBP3Q9H6Z4 567 aaPredicted RBP23.36■■□□□ 1.33
USP42-202ENST00000404008 RNF212BA8MTL3 300 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 HKR1P10072 659 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 S100GP29377 79 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 BLCAPP62952 87 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 Q8N9W7 124 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 NPBQ8NG41 125 aa23.35■■□□□ 1.33
USP42-202ENST00000404008 C7orf50Q9BRJ6 194 aaKnown RBP23.35■■□□□ 1.33
USP42-202ENST00000404008 NBR2O15453 112 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 NDUFA7O95182 113 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 CRYZL1O95825 349 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 CTSDP07339 412 aaPredicted RBP23.34■■□□□ 1.33
USP42-202ENST00000404008 KIR2DS2P43631 304 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 RND3P61587 244 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 RPS16P62249 146 aaKnown RBP23.34■■□□□ 1.33
USP42-202ENST00000404008 ABCA11PQ4W5N1 156 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 Q6ZSV7 163 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 FAM71E2Q8N5Q1 922 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 TMEM158Q8WZ71 300 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 GPR132Q9UNW8 380 aa23.34■■□□□ 1.33
USP42-202ENST00000404008 CENPXA8MT69 81 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 PLA2G10O15496 165 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 PEX14O75381 377 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 UPK1BO75841 260 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 TSPAN9O75954 239 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 NDUFA3O95167 84 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 PIGPP57054 158 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 TBC1D26Q86UD7 250 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 SPAG16Q8N0X2 631 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 OR4S2Q8NH73 311 aa23.33■■□□□ 1.33
USP42-202ENST00000404008 RAMP3O60896 148 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 RAG2P55895 527 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 OSR1Q8TAX0 266 aaPredicted RBP23.32■■□□□ 1.32
USP42-202ENST00000404008 HARBI1Q96MB7 349 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 TSNAXQ99598 290 aaKnown RBP23.32■■□□□ 1.32
USP42-202ENST00000404008 RTBDNQ9BSG5 229 aaPredicted RBP23.32■■□□□ 1.32
USP42-202ENST00000404008 C19orf24Q9BVV8 132 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 C5orf66Q9H5L9 145 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 ZNF702PQ9H963 129 aa23.32■■□□□ 1.32
USP42-202ENST00000404008 C14orf166Q9Y224 244 aaKnown RBP23.32■■□□□ 1.32
USP42-202ENST00000404008 SHOXO15266 292 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 RBFOX2O43251 390 aaKnown RBP eCLIP23.31■■□□□ 1.32
USP42-202ENST00000404008 F2RP25116 425 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 POC5Q8NA72 575 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 SCGB3A2Q96PL1 93 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 PRSS22Q9GZN4 317 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 LIN7CQ9NUP9 197 aaKnown RBP23.31■■□□□ 1.32
USP42-202ENST00000404008 KIAA1456Q9P272 454 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 VSIG4Q9Y279 399 aa23.31■■□□□ 1.32
USP42-202ENST00000404008 SH2D7A6NKC9 451 aaPredicted RBP23.3■■□□□ 1.32
USP42-202ENST00000404008 MPPED1O15442 326 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 SPDEFO95238 335 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 IGLV2-23P01705 113 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 BTCP35070 178 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 LGALS7P47929 136 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 CCR6P51684 374 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 PSG5Q15238 335 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 Q6ZS46 218 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 Q8N2B8 174 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 CD300LFQ8TDQ1 290 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 SLC25A21Q9BQT8 299 aaPredicted RBP23.3■■□□□ 1.32
USP42-202ENST00000404008 C16orf95Q9H693 158 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 COPZ2Q9P299 210 aa23.3■■□□□ 1.32
USP42-202ENST00000404008 SRRM4A7MD48 611 aaKnown RBP23.29■■□□□ 1.32
USP42-202ENST00000404008 RRHO14718 337 aa23.29■■□□□ 1.32
USP42-202ENST00000404008 C5orf64Q2M2E5 130 aa23.29■■□□□ 1.32
USP42-202ENST00000404008 TCTEX1D1Q8N7M0 179 aa23.29■■□□□ 1.32
USP42-202ENST00000404008 CCDC71LQ8N9Z2 235 aa23.29■■□□□ 1.32
USP42-202ENST00000404008 RASL11BQ9BPW5 248 aa23.29■■□□□ 1.32
USP42-202ENST00000404008 LYRM1O43325 122 aa23.28■■□□□ 1.32
USP42-202ENST00000404008 VSIG10L2P0DP72 767 aa23.28■■□□□ 1.32
USP42-202ENST00000404008 OR4F5Q8NH21 305 aa23.28■■□□□ 1.32
USP42-202ENST00000404008 TMEM89A2RUT3 159 aa23.27■■□□□ 1.32
USP42-202ENST00000404008 IFITM3Q01628 133 aa23.27■■□□□ 1.32
USP42-202ENST00000404008 RBMS2Q15434 407 aaKnown RBP23.27■■□□□ 1.32
USP42-202ENST00000404008 FBXL15Q9H469 300 aa23.27■■□□□ 1.32
USP42-202ENST00000404008 METTL1Q9UBP6 276 aaKnown RBP23.27■■□□□ 1.32
USP42-202ENST00000404008 TBC1D24Q9ULP9 559 aa23.27■■□□□ 1.32
USP42-202ENST00000404008 SLC25A17O43808 307 aa23.27■■□□□ 1.31
USP42-202ENST00000404008 FAM212BQ9NTI7 297 aaPredicted RBP23.27■■□□□ 1.31
USP42-202ENST00000404008 HPRT1P00492 218 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 ASAH1Q13510 395 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 KRTAP21-3Q3LHN1 58 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 ZNF585BQ52M93 769 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 ADAD2Q8NCV1 583 aaKnown RBP23.26■■□□□ 1.31
USP42-202ENST00000404008 OR2T6Q8NHC8 308 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 LINC01006Q8NI28 216 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 PLEKHA2Q9HB19 425 aa23.26■■□□□ 1.31
USP42-202ENST00000404008 COL6A5A8TX70 2615 aa23.25■■□□□ 1.31
USP42-202ENST00000404008 TENM1Q9UKZ4 2725 aa23.25■■□□□ 1.31
USP42-202ENST00000404008 NDUFB6O95139 128 aa23.25■■□□□ 1.31
USP42-202ENST00000404008 CRYGBP07316 175 aa23.25■■□□□ 1.31
USP42-202ENST00000404008 UBE2KP61086 200 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms